Hi Thomas, I like the design you proposed, and I agree it is a good idea to list other data types (STRING, INT, DOUBLE etc).
Cheers, Tomas The proposed On Nov 5, 2014, at 23:55, TFRD (Thomas Franck Dyrlund) <t...@steno.dk<mailto:t...@steno.dk>> wrote: Hi Tomas I have modified the SQL export parameter prompt to include all the information available under the data file elements: <image001.png> Do you have any comments to the above before I start modifying SQLExportTask.java to accommodate the above changes? I will implement the changes so that only if a data file element is chosen then all sample files are exported. In that way the current implementation shouldn’t be broken. This is also the reason why the isotope and MS/MS pattern are grouped under the identity element. And I guess the reason why (BLOB) is listed is to show the data format for that data type. Any reason why this is not shown in the export value instead and then also implemented for all the other data types to show if it is a STRING, INT … ? Best, Thomas From: Tomas Pluskal [mailto:plus...@oist.jp] Sent: 1. november 2014 09:12 To: Developer discussion Subject: Re: [Mzmine-devel] Peak list export Hi Thomas, We are using the SQL export function in our lab, so I would prefer if the current functionality is not broken. However, feel free to extend the functionality - e.g. by adding an option to export all peaks in the row. Best regards, Tomas On Oct 31, 2014, at 19:12, TFRD (Thomas Franck Dyrlund) <t...@steno.dk<mailto:t...@steno.dk>> wrote: I have been looking into the sql export function of MZmine and would like to discuss the implementation – it seems that the sql export function is different than the csv export. The issue is that when exporting data from an aligned peak list, the values in mz, rt, peak height and peak area are average values based on all samples. Is there a reason for this average value implementation and do you know if anyone uses it? In my opinion – and based on what I need for my data processing – then a better implementation would be to export all values for each individual sample in the peak list. Best regards, Thomas ------------------------------------------------------------------------------ _______________________________________________ Mzmine-devel mailing list Mzmine-devel@lists.sourceforge.net<mailto:Mzmine-devel@lists.sourceforge.net> https://lists.sourceforge.net/lists/listinfo/mzmine-devel =============================================== Tomas Pluskal G0 Cell Unit, Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan WWW: https://groups.oist.jp/g0 TEL: +81-98-966-8684 Fax: +81-98-966-2890 ------------------------------------------------------------------------------ _______________________________________________ Mzmine-devel mailing list Mzmine-devel@lists.sourceforge.net<mailto:Mzmine-devel@lists.sourceforge.net> https://lists.sourceforge.net/lists/listinfo/mzmine-devel =============================================== Tomas Pluskal G0 Cell Unit, Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan WWW: https://groups.oist.jp/g0 TEL: +81-98-966-8684 Fax: +81-98-966-2890
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