On Thu, 09 Jan 2014, Jonathan Brooks wrote: > Here you go….
> $ sudo apt-cache policy libnifti2 > libnifti2: > Installed: 2.0.0-1 > Candidate: 2.0.0-1 > Version table: > *** 2.0.0-1 0 > 500 http://gb.archive.ubuntu.com/ubuntu/ precise/universe amd64 > Packages > 100 /var/lib/dpkg/status > Does that match other installed versions? yeap good news -- could reproduce in precise chroot bad news -- would need more troubleshooting (by me or anyone else) etc next suspect is the actual zlib1g which is quite aged in 12.04: 1:1.2.3.4.dfsg-3ubuntu4 as opposed to e.g. 1:1.2.7.dfsg-13 in Debian wheezy. upstream's changelog of fixes between the two is quite long. reason: valgrind complaints: ==3955== Conditional jump or move depends on uninitialised value(s) ==3955== at 0x76844E0: inflateReset2 (in /lib/x86_64-linux-gnu/libz.so.1.2.3.4) ==3955== by 0x76845D8: inflateInit2_ (in /lib/x86_64-linux-gnu/libz.so.1.2.3.4) ==3955== by 0x767E323: ??? (in /lib/x86_64-linux-gnu/libz.so.1.2.3.4) ==3955== by 0x52AC238: znzopen (in /usr/lib/libznz.so.2.0.0) ==3955== by 0x5092CE4: nifti_fileexists (in /usr/lib/libniftiio.so.2.0.0) ==3955== by 0x50932C9: nifti_findhdrname (in /usr/lib/libniftiio.so.2.0.0) ==3955== by 0x47E17D: FslFileExists (in /usr/bin/atlasquery) ==3955== by 0x482EFC: FslXOpen (in /usr/bin/atlasquery) ==3955== by 0x44C47A: Image::Image(std::string const&) (in /usr/bin/atlasquery) ==3955== by 0x44C9DD: Image::load(std::string const&, bool) (in /usr/bin/atlasquery) ==3955== by 0x4342E1: readImage(std::string const&, QDomNode&, std::string const&) (in /usr/bin/atlasquery) ==3955== by 0x4366C6: FileManager::readXMLAtlas(std::string const&, std::string const&) (in /usr/bin/atlasquery) I am not sure if that would be safe to just provide a backport (someone would need to check if API/ABI hasn't changed etc). -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org Senior Research Associate, Psychological and Brain Sciences Dept. Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419 WWW: http://www.linkedin.com/in/yarik _______________________________________________ Neurodebian-users mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/neurodebian-users
