Hi, it seems to me that the culprit is the 'fslpy' package that "monkey patches" the read_segments() function from NiBabel. The signature of this function changed in Nibabel 2.2.0. Hence, all software using this bit of fslpy is broken, including the latest fsleyes 0.15.1.
I could not find a fix in the fslpy source repo. I am CC'ing the fslpy author. @Paul: could you please ping me when there is a fix. Thanks! Once I have this fix, I will roll out updates for packages: indexed_gzip fslpy fsleyes-props fsleyes-widgets fsleyes Michael On Fri, Oct 20, 2017 at 03:11:45PM +0200, Michael Hanke wrote: > Thanks, we saw that too yesterday. It is on my list of things to fix, by > updating fsleyes, presumably. > > michael > > > > On Oct 20, 2017 14:58, "marco tettamanti" <[email protected]> wrote: > > > Dear Neurodebianers, > > a recent upgrade from python-nibabel 2.1.0 to 2.2.0 broke the > > functionality of fsleyes 0.10.1-2 installed on my Debian testing distro: > > > > Linux bll4 4.12.0-2-amd64 #1 SMP Debian 4.12.13-1 (2017-09-19) x86_64 > > GNU/Linux > > > > Nifti images were not displayed and loading caused the error message: > > "read_arguments takes exactly 3 arguments (4 given)" > > > > Reverting back to python-nibabel 2.1.0 solved the problem. > > > > Best wishes, > > Marco > > > > -- > > Marco Tettamanti, Ph.D. > > Nuclear Medicine Department & Division of Neuroscience > > IRCCS San Raffaele Scientific Institute > > Via Olgettina 58 > > I-20132 Milano, Italy > > Phone ++39-02-26434888 <+39%2002%202643%204888> > > Fax ++39-02-26434892 <+39%2002%202643%204892> > > Email: [email protected] > > Skype: mtettamantihttp://scholar.google.it/citations?user=x4qQl4AAAAAJ > > > > > > > > > > *Rispetta l’ambiente: non stampare questa mail se non è necessario. > > Respect the environment: if it's not necessary, don't print this mail.* > > > > _______________________________________________ > > Neurodebian-users mailing list > > [email protected] > > http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/neurodebian-users > > -- Michael Hanke GPG: 4096R/C073D2287FFB9E9B http://psychoinformatics.de _______________________________________________ Neurodebian-users mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/neurodebian-users
