Fresh versions for all these packages are uploaded now. FSLeyes is running again!
Michael On Sat, Oct 21, 2017 at 2:15 PM, Michael Hanke <[email protected]> wrote: > Hi, > > it seems to me that the culprit is the 'fslpy' package that "monkey > patches" the read_segments() function from NiBabel. The signature of > this function changed in Nibabel 2.2.0. Hence, all software using this > bit of fslpy is broken, including the latest fsleyes 0.15.1. > > I could not find a fix in the fslpy source repo. I am CC'ing the fslpy > author. > > @Paul: could you please ping me when there is a fix. Thanks! > > Once I have this fix, I will roll out updates for packages: > > indexed_gzip > fslpy > fsleyes-props > fsleyes-widgets > fsleyes > > > Michael > > > > On Fri, Oct 20, 2017 at 03:11:45PM +0200, Michael Hanke wrote: >> Thanks, we saw that too yesterday. It is on my list of things to fix, by >> updating fsleyes, presumably. >> >> michael >> >> >> >> On Oct 20, 2017 14:58, "marco tettamanti" <[email protected]> wrote: >> >> > Dear Neurodebianers, >> > a recent upgrade from python-nibabel 2.1.0 to 2.2.0 broke the >> > functionality of fsleyes 0.10.1-2 installed on my Debian testing distro: >> > >> > Linux bll4 4.12.0-2-amd64 #1 SMP Debian 4.12.13-1 (2017-09-19) x86_64 >> > GNU/Linux >> > >> > Nifti images were not displayed and loading caused the error message: >> > "read_arguments takes exactly 3 arguments (4 given)" >> > >> > Reverting back to python-nibabel 2.1.0 solved the problem. >> > >> > Best wishes, >> > Marco >> > >> > -- >> > Marco Tettamanti, Ph.D. >> > Nuclear Medicine Department & Division of Neuroscience >> > IRCCS San Raffaele Scientific Institute >> > Via Olgettina 58 >> > I-20132 Milano, Italy >> > Phone ++39-02-26434888 <+39%2002%202643%204888> >> > Fax ++39-02-26434892 <+39%2002%202643%204892> >> > Email: [email protected] >> > Skype: mtettamantihttp://scholar.google.it/citations?user=x4qQl4AAAAAJ >> > >> > >> > >> > >> > *Rispetta l’ambiente: non stampare questa mail se non è necessario. >> > Respect the environment: if it's not necessary, don't print this mail.* >> > >> > _______________________________________________ >> > Neurodebian-users mailing list >> > [email protected] >> > http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/neurodebian-users >> > > > -- > Michael Hanke > GPG: 4096R/C073D2287FFB9E9B > http://psychoinformatics.de _______________________________________________ Neurodebian-users mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/neurodebian-users
