Completely different scenario - but - I once did an engine swap in a Mazda
pickup truck - the problem was, between 1989 (year of truck) and 1986 (year
of engine) apparently they reversed the cooling water flow direction,
altered the wiring harness and made the engine .2 liter bigger - all of
which caused me to blow the replacement engine next spring when it
overheated (again wrong cooling direction) and the headgasket blew.
             Wasn't fun.
             In short - yes - anything but exact year to year swap will have
some glitches - it is not outside the realm of possibility to have the
addition or deletion of an electrical connection, it may be as simple as a
ground, it could be as complex as a sensor that will not allow the engine to
run (unlikely on a bike).
              Good luck and let us know!
            -Joey

On Tue, Aug 2, 2011 at 3:51 PM, dapperdan7 <[email protected]> wrote:

> ok, before i throw my engine back in, a quick question. the harness
> on the new engine is slightly different than the connecting harness on
> the bike. there seems to be an extra connection on the bike harness.
> since both engines are pretty much the same, can there be an extra
> unneeded  connector?  a mechanic told me that was possible. any input
> for this novice mechanic is much appreciated
>
> dan
>
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-- 
-Joey Kelley
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