See <https://builds.apache.org/job/ctakes-trunk-Java-1.9/32/display/redirect?page=changes>
Changes: [tmill] Fix to patient-aware coreference with new API. Compiles and evaluates correctly. ------------------------------------------ [...truncated 324.93 KB...] A ctakes-lvg/src/main/java/org A ctakes-lvg/src/main/java/org/apache A ctakes-lvg/src/main/java/org/apache/ctakes A ctakes-lvg/src/main/java/org/apache/ctakes/lvg A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae/LvgBaseTokenAnnotator.java A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae/LvgSingleton.java A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae/LvgAnnotator.java A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/ae/ThreadSafeLvg.java A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/resource A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/resource/LvgCmdApiResourceImpl.java A ctakes-lvg/src/main/java/org/apache/ctakes/lvg/resource/LvgCmdApiResource.java A ctakes-lvg/pom.xml A ctakes-lvg/resources A ctakes-lvg/resources/launch AU ctakes-lvg/resources/launch/UIMA_CVD--LVG.launch A ctakes-lvg/README A ctakes-lvg/desc A ctakes-lvg/desc/analysis_engine A ctakes-lvg/desc/analysis_engine/LvgAnnotator.xml A ctakes-lvg/desc/analysis_engine/AggregateAE.xml A ctakes-context-tokenizer A ctakes-context-tokenizer/data A ctakes-context-tokenizer/data/test A ctakes-context-tokenizer/data/test/output A ctakes-context-tokenizer/pom.xml A ctakes-context-tokenizer/resources A ctakes-context-tokenizer/resources/launch A ctakes-context-tokenizer/README A ctakes-context-tokenizer/desc A ctakes-context-tokenizer/desc/analysis_engine A ctakes-context-tokenizer/desc/analysis_engine/TestTAE.xml A ctakes-context-tokenizer/desc/analysis_engine/AggregateAE.xml A ctakes-context-tokenizer/desc/analysis_engine/ContextDependentTokenizerAnnotator.xml A ctakes-context-tokenizer/LICENSE A ctakes-context-tokenizer/src A ctakes-context-tokenizer/src/test A ctakes-context-tokenizer/src/test/java A ctakes-context-tokenizer/src/test/java/org A ctakes-context-tokenizer/src/test/java/org/apache A ctakes-context-tokenizer/src/test/java/org/apache/ctakes A ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer A ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer/ae AU ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer/ae/TestContextDependentTokenizerAnnotator.java A ctakes-context-tokenizer/src/main A ctakes-context-tokenizer/src/main/java A ctakes-context-tokenizer/src/main/java/org A ctakes-context-tokenizer/src/main/java/org/apache A ctakes-context-tokenizer/src/main/java/org/apache/ctakes A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer/ae A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer/ae/ContextDependentTokenizerAnnotator.java A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/context A ctakes-ne-contexts-res A ctakes-ne-contexts-res/pom.xml A ctakes-ne-contexts-res/LICENSE A ctakes-ne-contexts-res/src A ctakes-ne-contexts-res/src/test A ctakes-ne-contexts-res/src/main A ctakes-ne-contexts-res/src/main/resources A ctakes-ne-contexts-res/src/main/resources/org A ctakes-ne-contexts-res/src/main/resources/org/apache A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/pipeline A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/pipeline/NeContextsSubPipe.piper A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/desc A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/desc/NegationAnnotator.xml A ctakes-chunker A ctakes-chunker/data A ctakes-chunker/data/chunk A ctakes-chunker/data/chunk/combinations A ctakes-chunker/data/chunk/ptb A ctakes-chunker/data/chunk/ptb/README A ctakes-chunker/data/chunk/genia A ctakes-chunker/data/chunk/genia/README A ctakes-chunker/data/chunk/genia/genia.opennlp.chunks A ctakes-chunker/data/treebank A ctakes-chunker/data/treebank/genia A ctakes-chunker/data/treebank/genia/names-00.txt A ctakes-chunker/data/treebank/genia/00 A ctakes-chunker/data/treebank/genia/names-01.txt A ctakes-chunker/data/treebank/genia/01 A ctakes-chunker/data/treebank/genia/README A ctakes-chunker/pom.xml A ctakes-chunker/resources A ctakes-chunker/resources/launch AU ctakes-chunker/resources/launch/ChunkAdjusterTests.launch AU ctakes-chunker/resources/launch/chunker.launch AU ctakes-chunker/resources/launch/UIMA_CPE_GUI--chunker.launch A ctakes-chunker/README A ctakes-chunker/ExampleTrainChunker.bat A ctakes-chunker/desc A ctakes-chunker/desc/AggregateAE.xml A ctakes-chunker/desc/collection_processing_engine A ctakes-chunker/desc/Chunker.xml A ctakes-chunker/desc/test A ctakes-chunker/desc/test/ChunkerAggregate.xml A ctakes-chunker/desc/test/ChunkerCPE.xml A ctakes-chunker/desc/test/POSTagger.xml A ctakes-chunker/desc/test/PhraseTypeChunkerAggregate.xml A ctakes-chunker/desc/test/Chunker.xml A ctakes-chunker/desc/test/TokenizerAnnotator.xml A ctakes-chunker/desc/test/ChunkAdjusterAggregate.xml A ctakes-chunker/desc/test/ChunkerCpeUsingPosTagDictionary.xml A ctakes-chunker/desc/test/SimpleSegmentAnnotator.xml A ctakes-chunker/desc/test/AdjustNounPhraseToIncludeFollowingPPNP.xml A ctakes-chunker/desc/SimpleSegmentAnnotator.xml A ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingNP.xml A ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingPPNP.xml A ctakes-chunker/desc/AdjustOPhraseToIncludeFollowingO.xml A ctakes-chunker/desc/ChunkerAggregate.xml A ctakes-chunker/desc/ChunkerCPE.xml A ctakes-chunker/desc/analysis_engine A ctakes-chunker/desc/ChunkAdjuster.xml A ctakes-chunker/desc/POSTagger.xml A ctakes-chunker/LICENSE A ctakes-chunker/scripts A ctakes-chunker/scripts/java A ctakes-chunker/scripts/java/data A ctakes-chunker/scripts/java/data/chunk A ctakes-chunker/scripts/java/data/chunk/genia A ctakes-chunker/scripts/java/data/chunk/genia/Genia2PTB.java A ctakes-chunker/scripts/java/data/chunk/Chunklink2OpenNLP.java A ctakes-chunker/scripts/perl A ctakes-chunker/scripts/perl/README A ctakes-chunker/scripts/groovy A ctakes-chunker/scripts/groovy/data A ctakes-chunker/scripts/groovy/data/chunk A ctakes-chunker/scripts/groovy/data/chunk/TagReport.groovy A ctakes-chunker/src A ctakes-chunker/src/test A ctakes-chunker/src/test/resources A ctakes-chunker/src/test/resources/data A ctakes-chunker/src/test/resources/data/README A ctakes-chunker/src/test/resources/data/output A ctakes-chunker/src/test/resources/data/output/text1.txt.included.used.tag-dictionary.xml A ctakes-chunker/src/test/resources/data/output/NotesIIST_RTF.DTD A ctakes-chunker/src/test/resources/data/output/text1.txt.included.xml A ctakes-chunker/src/test/resources/data/unit-test.opennlp.chunks A ctakes-chunker/src/test/resources/data/text-files A ctakes-chunker/src/test/resources/data/text-files/text1.txt A ctakes-chunker/src/test/java A ctakes-chunker/src/test/java/org A ctakes-chunker/src/test/java/org/apache A ctakes-chunker/src/test/java/org/apache/ctakes A ctakes-chunker/src/test/java/org/apache/ctakes/chunker A ctakes-chunker/src/test/java/org/apache/ctakes/chunker/ChunkAdjusterTests.java A ctakes-chunker/src/test/java/org/apache/ctakes/chunker/ChunkerTests.java A ctakes-chunker/src/main A ctakes-chunker/src/main/java A ctakes-chunker/src/main/java/org A ctakes-chunker/src/main/java/org/apache A ctakes-chunker/src/main/java/org/apache/ctakes A ctakes-chunker/src/main/java/org/apache/ctakes/chunker A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/adjuster A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/adjuster/ChunkAdjuster.java A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/ChunkCreator.java A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/DefaultChunkCreator.java A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/PhraseTypeChunkCreator.java A ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/Chunker.java A ctakes-dependency-parser-res A ctakes-dependency-parser-res/LICENSE A ctakes-dependency-parser-res/src A ctakes-dependency-parser-res/src/test A ctakes-dependency-parser-res/src/main A ctakes-dependency-parser-res/src/main/resources A ctakes-dependency-parser-res/src/main/resources/org A ctakes-dependency-parser-res/src/main/resources/org/apache A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/pred AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/pred/mayo-en-pred-1.3.0.jar A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency/README AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency/mayo-en-dep-1.3.0.jar A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl/mayo-en-srl-1.3.0.jar A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl/README AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/clearparser_models.jar A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/role AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/role/mayo-en-role-1.3.0.jar A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer A ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer/README AU ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer/dictionary-1.3.1.jar A ctakes-dependency-parser-res/pom.xml AU KEYS U . At revision 1815625 Parsing POMs Established TCP socket on 44993 maven35-agent.jar already up to date maven35-interceptor.jar already up to date maven3-interceptor-commons.jar already up to date [ctakes-trunk-Java-1.9] $ /home/jenkins/tools/java/latest1.9/bin/java -Xmx4g -Xms256m -Dmaven.test.failure.ignore=false -cp /home/jenkins/jenkins-slave/maven35-agent.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/boot/plexus-classworlds-2.5.2.jar:/home/jenkins/tools/maven/apache-maven-3.5.0/conf/logging jenkins.maven3.agent.Maven35Main /home/jenkins/tools/maven/apache-maven-3.5.0 /home/jenkins/jenkins-slave/slave.jar /home/jenkins/jenkins-slave/maven35-interceptor.jar /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar 44993 ERROR: Failed to parse POMs java.io.IOException: Cannot run program "/home/jenkins/tools/java/latest1.9/bin/java" (in directory "<https://builds.apache.org/job/ctakes-trunk-Java-1.9/ws/")>: error=2, No such file or directory at java.lang.ProcessBuilder.start(ProcessBuilder.java:1048) at hudson.Proc$LocalProc.<init>(Proc.java:249) at hudson.Proc$LocalProc.<init>(Proc.java:218) at hudson.Launcher$LocalLauncher.launch(Launcher.java:930) at hudson.Launcher$ProcStarter.start(Launcher.java:450) at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299) at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260) at hudson.remoting.UserRequest.perform(UserRequest.java:181) at hudson.remoting.UserRequest.perform(UserRequest.java:52) at hudson.remoting.Request$2.run(Request.java:336) at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:748) at ......remote call to ubuntu-eu3(Native Method) at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1554) at hudson.remoting.UserResponse.retrieve(UserRequest.java:281) at hudson.remoting.Channel.call(Channel.java:839) at hudson.Launcher$RemoteLauncher.launch(Launcher.java:1053) at hudson.Launcher$ProcStarter.start(Launcher.java:450) at hudson.maven.AbstractMavenProcessFactory.newProcess(AbstractMavenProcessFactory.java:278) at hudson.maven.ProcessCache.get(ProcessCache.java:236) at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:804) at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:496) at hudson.model.Run.execute(Run.java:1737) at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:543) at hudson.model.ResourceController.execute(ResourceController.java:97) at hudson.model.Executor.run(Executor.java:419) Caused by: java.io.IOException: error=2, No such file or directory at java.lang.UNIXProcess.forkAndExec(Native Method) at java.lang.UNIXProcess.<init>(UNIXProcess.java:247) at java.lang.ProcessImpl.start(ProcessImpl.java:134) at java.lang.ProcessBuilder.start(ProcessBuilder.java:1029) at hudson.Proc$LocalProc.<init>(Proc.java:249) at hudson.Proc$LocalProc.<init>(Proc.java:218) at hudson.Launcher$LocalLauncher.launch(Launcher.java:930) at hudson.Launcher$ProcStarter.start(Launcher.java:450) at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1299) at hudson.Launcher$RemoteLaunchCallable.call(Launcher.java:1260) at hudson.remoting.UserRequest.perform(UserRequest.java:181) at hudson.remoting.UserRequest.perform(UserRequest.java:52) at hudson.remoting.Request$2.run(Request.java:336) at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:748)
