> up like sulphur atoms not being recognized and getting atom type X (e.g. 
> in the thiophene C4H4S ring structure). Is anybody still working on this 
> stuff? Or should we just try to fix it as best we can and upload a new 
> version of the file?

I was not aware that the GAFF atom typing had not been validated. Certainly if 
you can fix it, that would be great. Better yet, maybe you can send some SDF 
files and we can add atom typing validation to the ffgaff unit tests.

Thanks,
-Geoff
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