There are two pieces to what we've been doing w/ OpenCog for bioinformatics
1) supervised classification of genomics datasets (e.g. SNPs, gene expression) using MOSES 2) integration of various ontologies into the Atomspace, import of MOSES classification models into the Atomspace, and use of PLN reasoning (currently on a pretty ad hoc, human guided basis) to do inference based on this combined data There are publications on both of these things, though I don't have time to dig up the URL right now, and Mike can point you to the code... ben On Sat, Mar 2, 2019 at 5:51 AM Linas Vepstas <[email protected]> wrote: > > Hi, > > Opencog has many parts to it.There is an agi-bio part for bioinformatics but > it seems slim, and I think the main part of that system is somewhere else. > I'm hoping Mike Duncan can respond in more detail. > > --linas > > On Fri, Mar 1, 2019 at 1:15 PM Abu Naser <[email protected]> wrote: >> >> Hello Everyone, >> >> I have just installed opencog on Ubuntu. I am a biologist and wish to use >> opencog for solving biological problems. I have been wondering whether >> there is any tutorial related to Bioinformatics. Please let me know. >> >> With best regards, >> >> Abu >> >> -- >> You received this message because you are subscribed to the Google Groups >> "opencog" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to [email protected]. >> To post to this group, send email to [email protected]. >> Visit this group at https://groups.google.com/group/opencog. >> To view this discussion on the web visit >> https://groups.google.com/d/msgid/opencog/b91a8dda-25db-48ea-80ed-776fed30dea6%40googlegroups.com. >> For more options, visit https://groups.google.com/d/optout. > > > > -- > cassette tapes - analog TV - film cameras - you > > -- > You received this message because you are subscribed to the Google Groups > "opencog" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at https://groups.google.com/group/opencog. > To view this discussion on the web visit > https://groups.google.com/d/msgid/opencog/CAHrUA34wuXH1z%3DiDwE9_HX7%2BN04SPyTHjzSp8hKPR6%2Bgih1rXA%40mail.gmail.com. > For more options, visit https://groups.google.com/d/optout. -- Ben Goertzel, PhD http://goertzel.org "Listen: This world is the lunatic's sphere, / Don't always agree it's real. / Even with my feet upon it / And the postman knowing my door / My address is somewhere else." -- Hafiz -- You received this message because you are subscribed to the Google Groups "opencog" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/opencog. To view this discussion on the web visit https://groups.google.com/d/msgid/opencog/CACYTDBe4hX_MK2x2wXRmZ6ZiVqGO5Q48FC%3DJoyPYWAUYOv3VBQ%40mail.gmail.com. For more options, visit https://groups.google.com/d/optout.
