Amnon Shabo wrote:

>Korag and Sam,
>As you may know, we have recently initiated a new SIG at HL7 called
>Clinical-Genomics, focusing on the use of genomic data in clinical
>scenarios. In particular I've been working on the usecase of tissue typing
>where more and more genomic data are being used to make the new methods of
>bone marrow transplantation more successful. In that SIG we have other
>people working on usecases in the areas of genomic-based diagnostics and
>clinical trials. in the later, patients are being tested for their genetic
>profile and conclusions are made accordingly so that inappropriately
>prescription could be avoided.
>
>In all these usecases we are trying to find the commonalities in the data
>representations (e.g., the representation of allele and its SNPs) and then
>come up with a domain information model using the HL7 tooling. I agree with
>you that genomic data are not just different data types and they do need
>special attention.... :-)
>
I knew there would be an expert on this list!

>I would be very happy to share this work or even collaborate with OpenEHR
>members of are interested in this domain and use the OpenEHR tools.
>
this would be very nice. Where do we start? I would think you could 
supply some use cases of data structures required to represent 
diagnostic information for various typical situations - this is what we 
need to consider in order to work out what to do in the EHR.

>At IBM Research we have been working intensively with a research center in
>Canada (iCapture) where mass clinical and genomic data were correlated to
>explore lung and hurt diseases (see InfoWorld article at
>http://www.infoworld.com/article/03/03/26/HNicapture_1.html).
>Thanks,
>Amnon.
>  
>
- thomas

>  
>



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