Hello community, here is the log from the commit of package python-astropy for openSUSE:Factory checked in at 2020-10-12 13:58:40 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Comparing /work/SRC/openSUSE:Factory/python-astropy (Old) and /work/SRC/openSUSE:Factory/.python-astropy.new.3486 (New) ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "python-astropy" Mon Oct 12 13:58:40 2020 rev:14 rq:840967 version:4.0.2 Changes: -------- --- /work/SRC/openSUSE:Factory/python-astropy/python-astropy.changes 2020-07-18 21:01:22.351506596 +0200 +++ /work/SRC/openSUSE:Factory/.python-astropy.new.3486/python-astropy.changes 2020-10-12 13:59:47.182227897 +0200 @@ -1,0 +2,201 @@ +Sat Oct 10 20:46:40 UTC 2020 - Benjamin Greiner <c...@bnavigator.de> + +- Update to 4.0.2 + New Features + * astropy.utils + astropy.utils.data.download_file now supports FTPS/FTP over + TLS. [#9964] + astropy.utils.data now uses a lock-free mechanism for caching. + This new mechanism uses a new cache layout and so ignores + caches created using earlier mechanisms (which were causing + lockups on clusters). The two cache formats can coexist but do + not share any files. [#10437, #10683] + astropy.utils.data now ignores the config item + astropy.utils.data.conf.download_cache_lock_attempts since no + locking is done. [#10437, #10683] + astropy.utils.data.download_file and related functions now + interpret the parameter or config file setting timeout=0 to + mean they should make no attempt to download files. [#10437, + #10683] + astropy.utils.import_file_to_cache now accepts a keyword-only + argument replace, defaulting to True, to determine whether it + should replace existing files in the cache, in a way as close + to atomic as possible. [#10437, #10683] + astropy.utils.data.download_file and related functions now + treat http://example.com and http://example.com/ as equivalent. + [#10631] + * astropy.wcs + The new auxiliary WCS parameters added in WCSLIB 7.1 are now + exposed as the aux attribute of Wcsprm. [#10333] + Updated bundled version of WCSLIB to v7.3. [#10433] + Bug fixes + * astropy.config + Added an extra fallback to os.expanduser('~') when trying to + find the user home directory. [#10570] + * astropy.constants + Corrected definition of parsec to 648 000 / pi AU following IAU + 2015 B2 [#10569] + * astropy.convolution + Fixed a bug where a float-typed integers in the argument + x_range of astropy.convolution.utils.discretize_oversample_1D + (and the 2D version as well) fails because it uses + numpy.linspace, which requires an int. [#10696] + * astropy.coordinates + Ensure that for size-1 array SkyCoord and coordinate frames the + attributes also properly become scalars when indexed with 0. + [#10113] + Fixed a bug where SkyCoord.separation() and + SkyCoord.separation_3d were not accepting a frame object. + [#10332] + Ensure that the lon values in SkyOffsetFrame are wrapped + correctly at 180 degree regardless of how the underlying data + is represented. [#10163] + Fixed an error in the obliquity of the ecliptic when + transforming to/from the *TrueEcliptic coordinate frames. The + error would primarily result in an inaccuracy in the ecliptic + latitude on the order of arcseconds. [#10129] + Fixed an error in the computation of the location of solar + system bodies where the Earth location of the observer was + ignored during the correction for light travel time. [#10292] + Ensure that coordinates with proper motion that are transformed + to other coordinate frames still can be represented properly. + [#10276] + Improve the error message given when trying to get a cartesian + representation for coordinates that have both proper motion and + radial velocity, but no distance. [#10276] + Fixed an error where SkyCoord.apply_space_motion would return + incorrect results when no distance is set and proper motion is + high. [#10296] + Make the parsing of angles thread-safe so that Angle can be + used in Python multithreading. [#10556] + Fixed reporting of EarthLocation.info which previously raised + an exception. [#10592] + * astropy.io.ascii + Fixed a bug with the C fast_reader not correctly parsing + newlines when delimiter was also set to \n or \r; ensured + consistent handling of input strings without newline + characters. [#9929] + * astropy.io.fits + Fix integer formats of TFORMn=Iw columns in ASCII tables to + correctly read values exceeding int32 - setting int16, int32 or + int64 according to w. [#9901] + Fix unclosed memory-mapped FITS files in FITSDiff when + difference found. [#10159] + Fix crash when reading an invalid table file. [#10171] + Fix duplication issue when setting a keyword ending with space. + [#10482] + Fix ResourceWarning with fits.writeto and pathlib.Path object. + [#10599] + Fix repr for commentary cards and strip spaces for commentary + keywords. [#10640] + Fix compilation of cfitsio with Xcode 12. [#10772] + Fix handling of 1-dimensional arrays with a single element in + BinTableHDU [#10768] + * astropy.io.misc + Fix id URL in baseframe-1.0.0 ASDF schema. [#10223] + Write keys to ASDF only if the value is present, to account for + a change in behavior in asdf 2.8. [#10674] + * astropy.io.registry + Fix Table.(read|write).help when reader or writer has no + docstring. [#10460] + * astropy.io.votable + Fixed parsing failure of VOTable with no fields. When detecting + a non-empty table with no fields, the following warning/ + exception is issued: E25 "No FIELDs are defined; DATA section + will be ignored." [#10192] + * astropy.modeling + Fixed a problem with mapping input_units and return_units of a + CompoundModel to the units of the constituent models. [#10158] + Removed hard-coded names of inputs and outputs. [#10174] + Fixed a problem where slicing a CompoundModel by name will + crash if there fix_inputs operators are present. [#10224] + Removed a limitation of fitting of data with units with + compound models without units when the expression involves + operators other than addition and subtraction. [#10415] + Fixed a problem with fitting Linear1D and Planar2D in model + sets. [#10623] + Fixed reported module name of math_functions model classes. + [#10694] + Fixed reported module name of tabular model classes. [#10709] + Do not create new math_functions models for ufuncs that are + only aliases (divide and mod). [#10697] + Fix calculation of the Moffat2D derivative with respect to + gamma. [#10784] + * astropy.stats + Fixed an API regression where SigmaClip.__call__ would convert + masked elements to nan and upcast the dtype to float64 in its + output MaskedArray when using the axis parameter along with the + defaults masked=True and copy=True. [#10610] + Fixed an issue where fully masked MaskedArray input to + sigma_clipped_stats gave incorrect results. [#10099] + Fixed an issue where sigma_clip and SigmaClip.__call__ would + return a masked array instead of a ndarray when masked=False + and the input was a full-masked MaskedArray. [#10099] + Fixed bug with funcs.poisson_conf_interval where an integer for + N with interval='kraft-burrows-nousek' would throw an error + with mpmath backend. [#10427] + Fixed bug in funcs.poisson_conf_interval with interval='kraft- + burrows-nousek' where certain combinations of source and + background count numbers led to ValueError due to the choice of + starting value for numerical optimization. [#10618] + * astropy.table + Fixed a bug when writing a table with mixin columns to FITS, + ECSV or HDF5. If one of the data attributes of the mixin (e.g. + skycoord.ra) had the same name as one of the table column names + (ra), the column (ra) would be dropped when reading the table + back. [#10222] + Fixed a bug when sorting an indexed table on the indexed column + after first sorting on another column. [#10103] + Fixed a bug in table argsort when called with reverse=True for + an indexed table. [#10103] + Fixed a performance regression introduced in #9048 when + initializing a table from Python lists. Also fixed incorrect + behavior (for data types other than float) when those lists + contain np.ma.masked elements to indicate masked data. [#10636] + Avoid modifying .meta when serializing columns to FITS. + [#10485] + Avoid crash when reading a FITS table that contains mixin info + and PyYAML is missing. [#10485] + * astropy.time + Ensure that for size-1 array Time, the location also properly + becomes a scalar when indexed with 0. [#10113] + * astropy.units + Refined test_parallax to resolve difference between 2012 and + 2015 definitions. [#10569] + * astropy.utils + The default IERS server has been updated to use the FTPS server + hosted by CDDIS. [#9964] + Fixed memory allocation on 64-bit systems within xml.iterparse + [#10076] + Fix case where None could be used in a numerical computation. + [#10126] + * astropy.visualization + Fixed a bug where the ImageNormalize clip keyword was ignored + when used with calling the object on data. [#10098] + Fixed a bug where axes.xlabel/axes.ylabel where not correctly + set nor returned on an EllipticalFrame class WCSAxes plot. + [#10446] + * astropy.wcs + Handled WCS 360 -> 0 deg crossover in fit_wcs_from_points + [#10155] + Do not issue DATREF warning when MJDREF has default value. + [#10440] + Fixed a bug due to which naxis argument was ignored if header + was supplied during the initialization of a WCS object. + [#10532] + Other Changes and Additions + * Improved the speed of sorting a large Table on a single column + by a factor of around 5. [#10103] + * Ensure that astropy can be used inside Application bundles + built with pyinstaller. [#8795] + * Updated the bundled CFITSIO library to 3.49. See cextern/ + cfitsio/docs/changes.txt for additional information. [#10256, + #10665] + * extract_array raises a ValueError if the data type of the input + array is inconsistent with the fill_value. [#10602] +- Drop merged PR patches + * astropy-pr10433-wcslib73-tests.patch gh#astropy/astropy#10433 ++++ 4 more lines (skipped) ++++ between /work/SRC/openSUSE:Factory/python-astropy/python-astropy.changes ++++ and /work/SRC/openSUSE:Factory/.python-astropy.new.3486/python-astropy.changes Old: ---- astropy-4.0.1.post1.tar.gz astropy-pr10433-wcslib73-tests.patch astropy-pr10440-wcs-datfix.patch New: ---- astropy-4.0.2.tar.gz ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Other differences: ------------------ ++++++ python-astropy.spec ++++++ --- /var/tmp/diff_new_pack.y8DV5n/_old 2020-10-12 13:59:50.270229185 +0200 +++ /var/tmp/diff_new_pack.y8DV5n/_new 2020-10-12 13:59:50.274229186 +0200 @@ -28,18 +28,14 @@ %define binaries fitsdiff fitsheader fitscheck fitsinfo fits2bitmap samp_hub showtable volint wcslint %define skip_python2 1 Name: python-astropy -Version: 4.0.1.post1 +Version: 4.0.2 Release: 0 Summary: Community-developed python astronomy tools License: BSD-3-Clause URL: https://astropy.org Source: https://files.pythonhosted.org/packages/source/a/astropy/astropy-%{version}.tar.gz -# PATCH-FIX-UPSTREAM astropy-pr10433-wcslib73-tests.patch gh#astropy/astropy#10433 -- allow system wcslib 7.3 -Patch0: astropy-pr10433-wcslib73-tests.patch -# PATCH-FIX-UPSTREAM astropy-pr10440-wcs-datfix.patch gh#astropy/astropy#10440 -- allow system wcslib 7.3 -Patch1: astropy-pr10440-wcs-datfix.patch # PATCH-FIX-UPSTREAM astropy-pr10545-remove-newline-3d_cd_hdr.patch gh#astropy/astropy#10545 -- clean up newlines after pytest output -Patch2: astropy-pr10545-remove-newline-3d_cd_hdr.patch +Patch0: astropy-pr10545-remove-newline-3d_cd_hdr.patch # Mark wcs headers as false positives for devel-file-in-non-devel-package # These are used by the python files so they must be available. Source100: python-astropy-rpmlintrc @@ -86,7 +82,6 @@ BuildRequires: %{python_module Jinja2} BuildRequires: %{python_module PyYAML} BuildRequires: %{python_module asdf >= 2.5} -BuildRequires: %{python_module astropy} BuildRequires: %{python_module beautifulsoup4} BuildRequires: %{python_module bleach} BuildRequires: %{python_module h5py} @@ -98,6 +93,7 @@ BuildRequires: %{python_module scipy >= 0.18} # /SECTION # SECTION test requirements +BuildRequires: %{python_module astropy = %{version}} BuildRequires: %{python_module mpmath} BuildRequires: %{python_module objgraph} BuildRequires: %{python_module pytest >= 3.1} @@ -162,13 +158,16 @@ %if %{with test} %check +# test matrix is ill-conditioned and fails occasionally +# https://github.com/astropy/astropy/issues/10675 +donttest="compound_fitting_with_units" %ifarch aarch64 # doctest failure because of precision errors - %define skip_pytest -k 'not bayesian_info_criterion_lsq' + donttest+=" or bayesian_info_criterion_lsq" %endif # http://docs.astropy.org/en/latest/development/testguide.html#running-tests # running pytest directly would require building the extensions inplace -%python_exec -B -c "import astropy, sys; sys.exit(astropy.test(args=\"-v %{?skip_pytest}\"))" +%python_exec -B -c "import astropy, sys; sys.exit(astropy.test(args=\"-v -k \\\"not ($donttest)\\\"\"))" %endif %if !%{with test} ++++++ astropy-4.0.1.post1.tar.gz -> astropy-4.0.2.tar.gz ++++++ /work/SRC/openSUSE:Factory/python-astropy/astropy-4.0.1.post1.tar.gz /work/SRC/openSUSE:Factory/.python-astropy.new.3486/astropy-4.0.2.tar.gz differ: char 5, line 1
