Hello community,
here is the log from the commit of package python-astropy for openSUSE:Factory
checked in at 2020-10-23 15:15:48
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Comparing /work/SRC/openSUSE:Factory/python-astropy (Old)
and /work/SRC/openSUSE:Factory/.python-astropy.new.3463 (New)
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "python-astropy"
Fri Oct 23 15:15:48 2020 rev:15 rq:843596 version:4.1
Changes:
--------
--- /work/SRC/openSUSE:Factory/python-astropy/python-astropy.changes
2020-10-12 13:59:47.182227897 +0200
+++ /work/SRC/openSUSE:Factory/.python-astropy.new.3463/python-astropy.changes
2020-10-23 15:15:51.690178070 +0200
@@ -1,0 +2,51 @@
+Thu Oct 22 09:36:36 UTC 2020 - Benjamin Greiner <c...@bnavigator.de>
+
+- Update to 4.1
+ Astropy 4.1 is a major release that contains bug fixes and new
+ features since the 4.0.x series of releases. In particular, this
+ release includes:
+ * A new SpectralCoord class for representing and transforming
+ spectral quantities
+ * Support for writing Dask arrays to FITS files
+ * Added True Equator Mean Equinox (TEME) frame for satellite two-
+ line ephemeris data
+ * Support for in-place setting of array-valued SkyCoord and frame
+ objects
+ * Change in the definition of equality comparison for coordinate
+ classes
+ * Support use of SkyCoord in table vstack, dstack, and insert_row
+ * Support for table cross-match join with SkyCoord or N-d columns
+ * Support for custom attributes in Table subclasses
+ * Added a new Time subformat unix_tai
+ * Added support for the -TAB convention in FITS WCS
+ * Support for replacing submodels in CompoundModel
+ * Support for units on otherwise unitless models via the
+ Model.coerce_units method.
+ * Support for ASDF serialization of models
+ In addition to these major changes, Astropy v4.0 includes a large
+ number of smaller improvements and bug fixes, which are described
+ in the Full Changelog. By the numbers:
+ * 381 issues have been closed since v4.0
+ * 511 pull requests have been merged since v4.0
+ * 66 distinct people have contributed code to this release, 23 of
+ which are first time contributors to Astropy
+- Drop astropy-pr10545-remove-newline-3d_cd_hdr.patch
+ * merged upstream
+ * gh#astropy/astropy#10545
+- Add astropy-pr10329-unbundle-erfa_4.1.patch
+ * Remove bundled _erfa but use system package pyerfa instead
+ * gh#astropy/astropy#10329
+- enable optional pytest-xdist
+
+-------------------------------------------------------------------
+Thu Oct 15 12:22:54 UTC 2020 - Benjamin Greiner <c...@bnavigator.de>
+
+- Update to 4.0.3
+ * astropy.table
+ Fixed a small bug where initializing an empty `Column`
+ with a structured dtype with a length and a shape
+ failed to give the requested dtype. [#10819]
+ * Fixed installation of the source distribution with
+ pip<19. [#10837, #10852]
+
+-------------------------------------------------------------------
Old:
----
astropy-4.0.2.tar.gz
astropy-pr10545-remove-newline-3d_cd_hdr.patch
New:
----
astropy-4.1.tar.gz
astropy-pr10329-unbundle-erfa_4.1.patch
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Other differences:
------------------
++++++ python-astropy.spec ++++++
--- /var/tmp/diff_new_pack.8L1gBx/_old 2020-10-23 15:15:52.414178419 +0200
+++ /var/tmp/diff_new_pack.8L1gBx/_new 2020-10-23 15:15:52.418178421 +0200
@@ -16,90 +16,103 @@
#
-%{?!python_module:%define python_module() python-%{**} python3-%{**}}
%global flavor @BUILD_FLAVOR@%{nil}
%if "%{flavor}" == "test"
-%define psuffix -test
%bcond_without test
%else
-%define psuffix %{nil}
%bcond_with test
%endif
+
%define binaries fitsdiff fitsheader fitscheck fitsinfo fits2bitmap samp_hub
showtable volint wcslint
+
+%bcond_without systemlibs
+%if %{with systemlibs}
+%define unbundle_libs export ASTROPY_USE_SYSTEM_CFITSIO=1 \
+ export ASTROPY_USE_SYSTEM_EXPAT=1 \
+ export ASTROPY_USE_SYSTEM_WCSLIB=1
+%endif
+
+%{?!python_module:%define python_module() python3-%{**}}
%define skip_python2 1
Name: python-astropy
-Version: 4.0.2
+Version: 4.1
Release: 0
Summary: Community-developed python astronomy tools
License: BSD-3-Clause
URL: https://astropy.org
Source:
https://files.pythonhosted.org/packages/source/a/astropy/astropy-%{version}.tar.gz
-# PATCH-FIX-UPSTREAM astropy-pr10545-remove-newline-3d_cd_hdr.patch
gh#astropy/astropy#10545 -- clean up newlines after pytest output
-Patch0: astropy-pr10545-remove-newline-3d_cd_hdr.patch
# Mark wcs headers as false positives for devel-file-in-non-devel-package
# These are used by the python files so they must be available.
Source100: python-astropy-rpmlintrc
+# PATCH-FEATURE-UPSTREAM astropy-pr10329-unbundle-erfa_4.1.patch
gh#astropy/astropy#10329 -- unbundle _erfa and use pyerfa instead
+Patch0: astropy-pr10329-unbundle-erfa_4.1.patch
+# https://docs.astropy.org/en/v4.1/install.html#requirements
BuildRequires: %{python_module Cython >= 0.21}
-BuildRequires: %{python_module astropy-helpers}
+BuildRequires: %{python_module Jinja2}
BuildRequires: %{python_module devel}
+BuildRequires: %{python_module extension-helpers}
BuildRequires: %{python_module numpy-devel >= 1.16}
-BuildRequires: %{python_module ply}
+BuildRequires: %{python_module setuptools_scm}
BuildRequires: %{python_module setuptools}
BuildRequires: fdupes
BuildRequires: hdf5-devel
-BuildRequires: libxml2-tools
BuildRequires: pkgconfig
BuildRequires: python-rpm-macros
-BuildRequires: pkgconfig(cfitsio)
-BuildRequires: pkgconfig(erfa) >= 1.7.0
-BuildRequires: pkgconfig(expat)
-BuildRequires: pkgconfig(wcslib)
-Requires: hdf5
-Requires: liberfa1 >= 1.7.0
+Requires: python >= 3.6
Requires: python-dbm
-Requires: python-matplotlib >= 2.1
-Requires: python-numpy >= 1.7.0
+Requires: python-numpy >= 1.16.0
Requires(post): update-alternatives
Requires(postun): update-alternatives
Recommends: libxml2-tools
Recommends: python-Bottleneck
-Recommends: python-Jinja2
-Recommends: python-PyYAML
-Recommends: python-asdf >= 2.5
+Recommends: python-PyYAML >= 3.12
+Recommends: python-asdf >= 2.6
Recommends: python-beautifulsoup4
Recommends: python-bleach
Recommends: python-h5py
-Recommends: python-ipython
+Recommends: python-html5lib
Recommends: python-jplephem
Recommends: python-matplotlib >= 2.1
+Recommends: python-mpmath
Recommends: python-pandas
-Recommends: python-scikit-image
Recommends: python-scipy >= 0.18
+Recommends: python-setuptools
+Recommends: python-sortedcontainers
Conflicts: perl-Data-ShowTable
+%if %{with systemlibs}
+BuildRequires: %{python_module pyerfa}
+BuildRequires: pkgconfig(cfitsio)
+BuildRequires: pkgconfig(expat)
+BuildRequires: pkgconfig(wcslib) >= 7
+Requires: python-pyerfa
+%endif
%if %{with test}
# SECTION Optional requirements
BuildRequires: %{python_module Bottleneck}
-BuildRequires: %{python_module Jinja2}
-BuildRequires: %{python_module PyYAML}
-BuildRequires: %{python_module asdf >= 2.5}
+BuildRequires: %{python_module PyYAML >= 3.12}
+BuildRequires: %{python_module asdf >= 2.6}
BuildRequires: %{python_module beautifulsoup4}
BuildRequires: %{python_module bleach}
BuildRequires: %{python_module h5py}
-BuildRequires: %{python_module ipython}
+BuildRequires: %{python_module html5lib}
BuildRequires: %{python_module jplephem}
BuildRequires: %{python_module matplotlib >= 2.1}
+BuildRequires: %{python_module mpmath}
BuildRequires: %{python_module pandas}
-BuildRequires: %{python_module scikit-image}
BuildRequires: %{python_module scipy >= 0.18}
+BuildRequires: %{python_module sortedcontainers}
+BuildRequires: libxml2-tools
# /SECTION
# SECTION test requirements
+# We need the compiled package for testing
BuildRequires: %{python_module astropy = %{version}}
-BuildRequires: %{python_module mpmath}
+BuildRequires: %{python_module ipython}
BuildRequires: %{python_module objgraph}
-BuildRequires: %{python_module pytest >= 3.1}
BuildRequires: %{python_module pytest-astropy}
-BuildRequires: %{python_module pytest-doctestplus >= 0.6}
BuildRequires: %{python_module pytest-mpl}
+BuildRequires: %{python_module pytest-xdist}
+BuildRequires: %{python_module sgp4}
+BuildRequires: %{python_module skyfield}
# /SECTION
%endif
%python_subpackages
@@ -113,61 +126,63 @@
%if !%{with test}
%prep
%setup -q -n astropy-%{version}
-%autopatch -p1
-# Disable test failure on DeprecationWarnings
-sed -i "/enable_deprecations_as_exceptions(/,/)/ d" astropy/conftest.py
+%if %{with systemlibs}
+# unbundle liberfa with new package pyerfa
+%patch0 -p1
+rm -rf cextern/erfa
+rm licenses/ERFA.rst
# Make sure bundled libs are not used
-rm -rf cextern/expat
-rm -rf cextern/erfa
rm -rf cextern/cfitsio
+rm -rf cextern/expat
rm -rf cextern/wcslib
+rm licenses/EXPAT_LICENSE.rst
+rm licenses/WCSLIB_LICENSE.rst
+
+%endif
-echo "[build]" >> setup.cfg
-echo "use_system_libraries=1" >> setup.cfg
+# Disable test failure on DeprecationWarnings
+sed -i "/enable_deprecations_as_exceptions(/,/)/ d" astropy/conftest.py
+# increase test deadline for slow obs executions (e.g. on s390x)
+echo "
+import hypothesis
+hypothesis.settings.register_profile('obs', deadline=1000)
+" >> astropy/conftest.py
%build
-%python_build --use-system-libraries --offline
+%{?unbundle_libs}
+%python_build
%install
-%python_install --use-system-libraries --offline
+%{?unbundle_libs}
+%python_install
for b in %{binaries}; do
%python_clone -a %{buildroot}%{_bindir}/$b
done
-chmod a-x
%{buildroot}%{python_sitearch}/astropy/wcs/tests/data/header_with_time.fits
-# Deduplicating files can generate a RPMLINT warning for pyc mtime
-%{python_expand %fdupes %{buildroot}%{$python_sitearch}
-rm -rf
%{buildroot}%{$python_sitearch}/astropy/io/misc/tests/__pycache__/__init__.*.pyc
-rm -rf
%{buildroot}%{$python_sitearch}/astropy/io/votable/tests/__pycache__/*_test.*.pyc
-rm -rf
%{buildroot}%{$python_sitearch}/astropy/io/votable/tests/__pycache__/__init__.*.pyc
-rm -rf
%{buildroot}%{$python_sitearch}/astropy/wcs/tests/__pycache__/__init__.*.pyc
-rm -rf
%{buildroot}%{$python_sitearch}/astropy/wcs/tests/extension/__pycache__/__init__.*.pyc
-$python -m compileall -d %{$python_sitearch}
%{buildroot}%{$python_sitearch}/astropy/io/misc/tests/
-$python -O -m compileall -d %{$python_sitearch}
%{buildroot}%{$python_sitearch}/astropy/io/misc/tests/
-$python -m compileall -d %{$python_sitearch}
%{buildroot}%{$python_sitearch}/astropy/io/votable/tests/
-$python -O -m compileall -d %{$python_sitearch}
%{buildroot}%{$python_sitearch}/astropy/io/votable/tests/
-$python -m compileall -d %{$python_sitearch}
%{buildroot}%{$python_sitearch}/astropy/stats/bls/tests/
-$python -O -m compileall -d %{$python_sitearch}
%{buildroot}%{$python_sitearch}/astropy/stats/bls/tests/
-$python -m compileall -d %{$python_sitearch}
%{buildroot}%{$python_sitearch}/astropy/wcs/tests/
-$python -O -m compileall -d %{$python_sitearch}
%{buildroot}%{$python_sitearch}/astropy/wcs/tests/
-%fdupes %{buildroot}%{$python_sitearch}
-}
+%python_expand %fdupes %{buildroot}%{$python_sitearch}
%endif
%if %{with test}
%check
-# test matrix is ill-conditioned and fails occasionally
-# https://github.com/astropy/astropy/issues/10675
-donttest="compound_fitting_with_units"
%ifarch aarch64
# doctest failure because of precision errors
donttest+=" or bayesian_info_criterion_lsq"
%endif
+testselect_expr="${donttest:+-k \"not (${donttest# or })\"}"
# http://docs.astropy.org/en/latest/development/testguide.html#running-tests
# running pytest directly would require building the extensions inplace
-%python_exec -B -c "import astropy, sys; sys.exit(astropy.test(args=\"-v -k
\\\"not ($donttest)\\\"\"))"
+%python_exec -B -c "
+import sys, astropy
+pytestargs = ('-v '
+ '-n auto ' # pytest-xdist
+ '-p no:cacheprovider '
+ '--hypothesis-profile=obs '
+ '$testselect_expr')
+returncode = astropy.test(args=pytestargs)
+sys.exit(returncode)
+"
%endif
%if !%{with test}
@@ -179,10 +194,10 @@
%files %{python_files}
%doc CHANGES.rst README.rst
-%license licenses/*
+%license LICENSE.rst licenses/*
%{expand:%(for b in %{binaries}; do echo "%%python_alternative
%%{_bindir}/$b"; done)}
%{python_sitearch}/astropy/
-%{python_sitearch}/astropy-%{version}-py*.egg-info
+%{python_sitearch}/astropy-%{version}*-info
%endif
%changelog
++++++ astropy-4.0.2.tar.gz -> astropy-4.1.tar.gz ++++++
/work/SRC/openSUSE:Factory/python-astropy/astropy-4.0.2.tar.gz
/work/SRC/openSUSE:Factory/.python-astropy.new.3463/astropy-4.1.tar.gz differ:
char 5, line 1
++++++ astropy-pr10329-unbundle-erfa_4.1.patch ++++++
++++ 38122 lines (skipped)
