Dear Julien, thank you very much for your reply. The script now works and is here https://github.com/madi/someRS/blob/master/segmentation.py (I share it just in case could be useful for others)
Best, Margherita On Friday, November 21, 2014 9:11:40 AM UTC+1, Julien Michel wrote: > > Hi, > > foutpos is actually an image of the spatial position to which each pixel > mode converges. This is a useful information that can be included in the > downtream steps of LSMS. You might want to try: > - foutpos > /home/user/GIS/CanopyHealthMonitoring/PWN/segmentation_result/E2370110_220612_FILTERED_SPATIAL_010.tif > > Regards, > > Julien > > Le 20/11/2014 18:33, [email protected] <javascript:> a écrit : > > Hi > > I want to reproduce this work flow > http://www.orfeo-toolbox.org/CookBook/CookBooksu42.html in a python > script. > My tentative (only step 1 and 2 implemented so far) is here > https://titanpad.com/A9SCzelK9m > > This script doesn't work and gives me something like: > > E2370110_220612 > sh: 1: /usr/bin/otbcli_MeanShiftSmoothing -in > /home/user/GIS/CanopyHealthMonitoring/PWN/imagery/Orto_2012/E2370110_220612.tif > > -spatialr 5 -ranger 15 -thres 0.1 -maxiter 100 -rangeramp 0 -modesearch > false -fout > /home/user/GIS/CanopyHealthMonitoring/PWN/segmentation_result/E2370110_220612_FILTERED_RANGE_010.tif > > -foutpos 0 : not found > E2370210_220612 > sh: 1: /usr/bin/otbcli_MeanShiftSmoothing -in > /home/user/GIS/CanopyHealthMonitoring/PWN/imagery/Orto_2012/E2370210_220612.tif > > -spatialr 5 -ranger 15 -thres 0.1 -maxiter 100 -rangeramp 0 -modesearch > false -fout > /home/user/GIS/CanopyHealthMonitoring/PWN/segmentation_result/E2370210_220612_FILTERED_RANGE_010.tif > > -foutpos 0 : not found > > [.. and so on] > > However, if I run > /usr/bin/otbcli_MeanShiftSmoothing -in > /home/user/GIS/CanopyHealthMonitoring/PWN/imagery/Orto_2012/E2370110_220612.tif > > -spatialr 5 -ranger 15 -thres 0.1 -maxiter 100 -rangeramp 0 -modesearch > false -fout > /home/user/GIS/CanopyHealthMonitoring/PWN/segmentation_result/E2370110_220612_FILTERED_RANGE_010.tif > > -foutpos 0 > it goes ahead. > > What am I missing? > > Thank you in advance, > Margherita > -- > -- > Check the OTB FAQ at > http://www.orfeo-toolbox.org/FAQ.html > > You received this message because you are subscribed to the Google > Groups "otb-users" group. > To post to this group, send email to [email protected] > <javascript:> > To unsubscribe from this group, send email to > [email protected] <javascript:> > For more options, visit this group at > http://groups.google.com/group/otb-users?hl=en > --- > You received this message because you are subscribed to the Google Groups > "otb-users" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected] <javascript:>. > For more options, visit https://groups.google.com/d/optout. > > > > -- > Julien MICHEL > CNES - DCT/SI/AP - BPI 1219 > 18, avenue Edouard Belin > 31401 Toulouse Cedex 09 - France > Tel: +33 561 282 894 - Fax: +33 561 283 109 > > -- -- Check the OTB FAQ at http://www.orfeo-toolbox.org/FAQ.html You received this message because you are subscribed to the Google Groups "otb-users" group. To post to this group, send email to [email protected] To unsubscribe from this group, send email to [email protected] For more options, visit this group at http://groups.google.com/group/otb-users?hl=en --- You received this message because you are subscribed to the Google Groups "otb-users" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. For more options, visit https://groups.google.com/d/optout.
