Remove the {}.
/Ole
On Mon, May 5, 2014 at 5:04 AM, V A Ramesh <varavind...@yahoo.com> wrote:
> Dear all,
>
>
> Version: GNU parallel 20140222,
> OS: CentOS 6.3;
>
> I was trying to run the following command,
>
> parallel -j5 {} < Test.in
>
> and the Test.in Contains
>
> /home/varamesh/Softwares/libsvm-3.18/svm-train -c 0.03125 -g 0.0625 -v 10
> Combined_Full.scaled >& Combined_Full.scaled_0.03125_0.0625.out
> /home/varamesh/Softwares/libsvm-3.18/svm-train -c 0.03125 -g 0.125 -v 10
> Combined_Full.scaled >& Combined_Full.scaled_0.03125_0.125.out
> /home/varamesh/Softwares/libsvm-3.18/svm-train -c 0.03125 -g 0.25 -v 10
> Combined_Full.scaled >& Combined_Full.scaled_0.03125_0.25.out
> /home/varamesh/Softwares/libsvm-3.18/svm-train -c 0.03125 -g 0.5 -v 10
> Combined_Full.scaled >& Combined_Full.scaled_0.03125_0.5.out
> /home/varamesh/Softwares/libsvm-3.18/svm-train -c 0.03125 -g 1 -v 10
> Combined_Full.scaled >& Combined_Full.scaled_0.03125_1.out
>
> All of these commands are valid commands and works perfectly if executed as
> serial jobs in a script.
>
> The error I was getting is,
>
> /bin/bash: /home/varamesh/Softwares/libsvm-3.18/svm-train -c 0.03125 -g
> 0.0625 -v 10 Combined_Full.scaled >& Combined_Full.scaled_0.03125_0.0625.out
> : No such file or directory
> /bin/bash: /home/varamesh/Softwares/libsvm-3.18/svm-train -c 0.03125 -g
> 0.125 -v 10 Combined_Full.scaled >& Combined_Full.scaled_0.03125_0.125.out :
> No such file or directory
> /bin/bash: /home/varamesh/Softwares/libsvm-3.18/svm-train -c 0.03125 -g 0.25
> -v 10 Combined_Full.scaled >& Combined_Full.scaled_0.03125_0.25.out : No
> such file or directory
> /bin/bash: /home/varamesh/Softwares/libsvm-3.18/svm-train -c 0.03125 -g 0.5
> -v 10 Combined_Full.scaled >& Combined_Full.scaled_0.03125_0.5.out : No such
> file or directory
> /bin/bash: /home/varamesh/Softwares/libsvm-3.18/svm-train -c 0.03125 -g 1 -v
> 10 Combined_Full.scaled >& Combined_Full.scaled_0.03125_1.out : No such file
> or directory
>
> All the files are present and
> /home/varamesh/Softwares/libsvm-3.18/svm-train is a valid Executable file. I
> had also tried giving path of the input file like
>
> "/home/varamesh/Softwares/libsvm-3.18/svm-train -c 0.03125 -g 0.0625 -v 10
> /home/varamesh/Work/Model_Building/Combined_Full.scaled >&
> ./Combined_Full.scaled_0.03125_0.0625.out" as input, Even this gave me the
> same Error. Please help me to solve the issue.
>
> Thanks in advance.
>
> --
> Vakkalagadda A Ramesh
> Jr. Research Fellow
> Lab of Computational Biology
> Centre for DNA Fingerprinting and Diagnostics (CDFD)
> Nampally
> Hyderabad-500001
> Lab: 040-24749368
> Mobile: 08686363632
