Hello,

thanks for the replies. I managed to get it working.

Pradeep

Le 7 janv. 2013 à 18:27, Jens Kleimann <[email protected]> a écrit :

> On 04.01.2013 04:19, Pradeep Jha wrote:
>> Hello Jens,
>> thanks for the response. It explained a lot. 
> 
> Pleasure!
> 
>> I have been reading up about XDMF and am trying to implement it. My 
>> filename.h5 file just contains a scalar value for 512*512*512 grid points in 
>> a structured uniform cube. I don't store any grid coordinates information in 
>> any files. But all the material I have been reading for XDMF mention that I 
>> have to give grid information. Is there a simple way of conveying my uniform 
>> grid structure to XDMF or should I create a file with grid coordinates and 
>> make XDMF read it?
> 
> In this simple case, you do not need a grid file with coordinates, but you 
> need to specify the type of grid and its origin and cell size so PV knows 
> where to locate the cells and what numbers to draw along the axes. The 
> (untested) sample file below should give you an idea of what is needed. This 
> grid cube has its origin at [0,0,0] and uses dx=dy=dz=0.1, i.e. it occupies 
> the cubic volume [0, 51.2]^3 in 3D space. Note that the grid size (513^3) has 
> to be larger than the number of data elements by one per direction because it 
> specifies the location of _nodes_ (corner vertices) of a cell.
> You will need to adapt the path and name of the HDF5 file and the location of 
> your scalar data field within that file, the former being separated from the 
> latter by a ":".
> 
> Good luck!
> Jens.
> 
> ======================== BEGIN file scalar_sample.xmf ===============
> <?xml version="1.0" ?>
> <!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []>
> <Xdmf>
>  <Domain>
>    <Grid Name="my_Grid" GridType="Uniform">
>      <Topology TopologyType="3DCoRectMesh" Dimensions="513 513 513">
>      </Topology>
>      <Geometry GeometryType="Origin_DxDyDz">
>       <DataItem Dimensions="3" NumberType="Float" Format="XML">
>         0 0 0
>        </DataItem>
>        <DataItem Dimensions="3" NumberType="Float" Format="XML">
>         0.1 0.1 0.1
>        </DataItem>
>      </Geometry>
>      <Attribute Name="my_Scalar" AttributeType="Scalar" Center="Cell">
>       <DataItem Dimensions="512 512 512" NumberType="Float" Format="HDF">
>         my_HDF_file.h5:/name_of_scalar_in_h5
>       </DataItem>
>      </Attribute>
>    </Grid>
>  </Domain>
> </Xdmf>
> ========================= END file scalar_sample.xmf ================

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