Hello, since Version 5, I have several problems using the xdmf reader. Unlike ParaView4.4.0, which is able to read it withou any problems, ParaView 5.1.0 and 5.0.1 fail to read the following xdmf file: (Please find the complete xdmf file here: https://fz-juelich.sciebo.de/index.php/s/f6VicXjvJz64q3l and the binary file here: https://fz-juelich.sciebo.de/index.php/s/XKcfR9kDKW9Nmct )
Can anyone reproduce the error? Has the xdmf reader changed sice 4.4.0? thanks for your help, Sonja ############################################################################################# <?xml version="1.0" ?> <!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []> <Xdmf xmlns:xi="http://www.w3.org/2001/XInclude"; Version="2.0"> <Domain> <Grid Name="timeslice 784" GridType="Uniform"> <Topology name="T00000" TopologyType="3DCoRectMesh" Dimensions=" 1000 400 1"> </Topology> <Geometry name="G00000" Type="ORIGIN_DXDYDZ"> <!-- Origin [um] --> <DataItem Format="XML" Dimensions="3"> 0.00000000E+00 0.00000000E+00 0.19949875E+02 </DataItem> <!-- DzDyDx [um] --> <DataItem Format="XML" Dimensions="3"> 0.50050050E-01 0.10025063E+00 0.10025063E+00 </DataItem> </Geometry> <!-- Time of timeslice [fs] --> <Time TimeType="Single" Value=" 0.93397947E+02"/> <!-- Particle densities per particle species [units] --> <Attribute Name="Charge density - electrons" Center="Node"> <DataItem Format="Binary" Seek=" 0" DataType="Float" Precision="4" Endian="Little" Dimensions=" 1000 400 1"> pfield00784 </DataItem> </Attribute> <Attribute Name="Charge density - protons" Center="Node"> <DataItem Format="Binary" Seek=" 1600000" DataType="Float" Precision="4" Endian="Little" Dimensions=" 1000 400 1"> pfield00784 </DataItem> </Attribute> ... ############################################################################################# the error message looks like this: Alloc :: Resource temporarily unavailable ERROR: In /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/IO/Xdmf2/vtkXdmfHeavyData.cxx, line 1208 vtkXdmfReader (0x3c794c0): Failed to read attribute data Alloc :: Resource temporarily unavailable ERROR: In /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/IO/Xdmf2/vtkXdmfHeavyData.cxx, line 1208 vtkXdmfReader (0x3c794c0): Failed to read attribute data Alloc :: Resource temporarily unavailable ERROR: In /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/IO/Xdmf2/vtkXdmfHeavyData.cxx, line 1208 vtkXdmfReader (0x3c794c0): Failed to read attribute data .... Alloc :: No such file or directory XDMF Error in /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfHDF.cxx line 551 (Memory Object Array has no data storage) XDMF Error in /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfHDF.cxx line 905 (Can't Read Temp Dataset) Alloc :: No such file or directory XDMF Error in /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfHDF.cxx line 551 (Memory Object Array has no data storage) XDMF Error in /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfHDF.cxx line 905 (Can't Read Temp Dataset) Alloc :: No such file or directory XDMF Error in /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfHDF.cxx line 551 (Memory Object Array has no data storage) XDMF Error in /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfHDF.cxx line 905 (Can't Read Temp Dataset) Alloc :: Success XDMF Error in /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfHDF.cxx line 551 (Memory Object Array has no data storage) XDMF Error in /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/ThirdParty/xdmf2/vtkxdmf2/libsrc/XdmfHDF.cxx line 905 (Can't Read Temp Dataset) Alloc :: Success ... Generic Warning: In /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/Rendering/Volume/vtkVolumeTextureMapper3D.cxx, line 682 vtkVolumeTextureMapper3D::vtkVolumeTextureMapper3D was deprecated for VTK 7.0 and will be removed in a future version. Generic Warning: In /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/Rendering/VolumeOpenGL/vtkOpenGLVolumeTextureMapper3D.cxx, line 57 vtkOpenGLVolumeTextureMapper3D::vtkOpenGLVolumeTextureMapper3D was deprecated for VTK 7.0 and will be removed in a future version. ERROR: In /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/Common/Core/vtkAOSDataArrayTemplate.txx, line 153 vtkFloatArray (0x5490c60): Source array too small, requested tuple at index 0, but there are only 0 tuples in the array. ERROR: In /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/Common/Core/vtkAOSDataArrayTemplate.txx, line 153 vtkFloatArray (0x5490e60): Source array too small, requested tuple at index 0, but there are only 0 tuples in the array. ERROR: In /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/Common/Core/vtkAOSDataArrayTemplate.txx, line 153 vtkFloatArray (0x5491200): Source array too small, requested tuple at index 0, but there are only 0 tuples in the array. ERROR: In /dev/shm/domini/ParaView/5.1.0/ipsmpi-2016a/ParaView-v5.1.0/VTK/Common/Core/vtkAOSDataArrayTemplate.txx, line 153 vtkFloatArray (0x54915a0): Source array too small, requested tuple at index 0, but there are only 0 tuples in the array. ... ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Sebastian M. 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