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Hi, as I am relatively new to Perl
it would be great if anybody of you could help me to solve the following
problem: Description of the problem: - I would like to read a
sequence in Fasta Format (stored as text file on a
local hard disk) e.g > Test1 AGTGGTGCAGTGCGTCGTTTTTGCAGTCCC..... - Then I would like to search
for a certain pattern within the sequence (e.g. AGTG). à I know how to do that but now comes
my question What modules do I need to
graphically display all found patterns within the queried sequence? Example for the output on the
screen: >Test1 AGTGGTGCAGTGCGTCGTTTTTGCAGTCCC.... Is there same code (examples)
available? Thanks for your help Heiko |
- Pattern search program Heiko Nieke
- Pattern search program brianr
- Re: Pattern search program Jonathan Epstein
- Re: Pattern search program matt . b . grimaldi
