hmm - the tarball is a year old.. [petsc:pub/petsc/externalpackages] petsc> ls -lt sowing-1.1.11-a.tar.gz -rw-r--r-- 1 petsc pdetools 630610 2008-12-15 22:21 sowing-1.1.11-a.tar.gz [petsc:pub/petsc/externalpackages] petsc>
Satish On Mon, 21 Dec 2009, Matthew Knepley wrote: > I killed my directory, removed sowing from extpacks, and reran configure, > but I get > > TESTING: checkSharedLibrary from > PETSc.packages.sowing(config/BuildSystem/config/package.py:423) > *** stack smashing detected ***: > /PETSc3/petsc/petsc-dev/linux-gnu-cxx-debug/bin/bfort terminated > ======= Backtrace: ========= > /lib/tls/i686/cmov/libc.so.6(__fortify_fail+0x48)[0xb7daf138] > /lib/tls/i686/cmov/libc.so.6(__fortify_fail+0x0)[0xb7daf0f0] > /PETSc3/petsc/petsc-dev/linux-gnu-cxx-debug/bin/bfort[0x8052504] > /PETSc3/petsc/petsc-dev/linux-gnu-cxx-debug/bin/bfort[0x804a686] > /PETSc3/petsc/petsc-dev/linux-gnu-cxx-debug/bin/bfort[0x804a0b3] > /lib/tls/i686/cmov/libc.so.6(__libc_start_main+0xe0)[0xb7cd8450] > /PETSc3/petsc/petsc-dev/linux-gnu-cxx-debug/bin/bfort[0x80490b1] > ======= Memory map: ======== > 08048000-08054000 r-xp 00000000 08:06 5030686 > /PETSc3/petsc/petsc-dev/linux-gnu-cxx-debug/bin/bfort > 08054000-08055000 rw-p 0000c000 08:06 5030686 > /PETSc3/petsc/petsc-dev/linux-gnu-cxx-debug/bin/bfort > 08055000-08077000 rw-p 08055000 00:00 0 [heap] > b7cc1000-b7cc2000 rw-p b7cc1000 00:00 0 > b7cc2000-b7e0b000 r-xp 00000000 08:06 2352482 /lib/tls/i686/cmov/ > libc-2.7.so > b7e0b000-b7e0c000 r--p 00149000 08:06 2352482 /lib/tls/i686/cmov/ > libc-2.7.so > b7e0c000-b7e0e000 rw-p 0014a000 08:06 2352482 /lib/tls/i686/cmov/ > libc-2.7.so > b7e0e000-b7e11000 rw-p b7e0e000 00:00 0 > b7e11000-b7e18000 r-xp 00000000 08:06 2352512 /lib/tls/i686/cmov/ > librt-2.7.so > b7e18000-b7e1a000 rw-p 00006000 08:06 2352512 /lib/tls/i686/cmov/ > librt-2.7.so > b7e1a000-b7e1b000 rw-p b7e1a000 00:00 0 > b7e1b000-b7e2f000 r-xp 00000000 08:06 2352508 /lib/tls/i686/cmov/ > libpthread-2.7.so > b7e2f000-b7e31000 rw-p 00013000 08:06 2352508 /lib/tls/i686/cmov/ > libpthread-2.7.so > b7e31000-b7e33000 rw-p b7e31000 00:00 0 > b7e38000-b7e42000 r-xp 00000000 08:06 2334868 /lib/libgcc_s.so.1 > b7e42000-b7e43000 rw-p 0000a000 08:06 2334868 /lib/libgcc_s.so.1 > b7e43000-b7e46000 rw-p b7e43000 00:00 0 > b7e46000-b7f04000 r-xp 00000000 08:06 5030650 > /PETSc3/petsc/petsc-dev/linux-gnu-cxx-debug/lib/libmpich.so.1.1 > b7f04000-b7f07000 rw-p 000bd000 08:06 5030650 > /PETSc3/petsc/petsc-dev/linux-gnu-cxx-debug/lib/libmpich.so.1.1 > b7f07000-b7f29000 rw-p b7f07000 00:00 0 > b7f29000-b7f2a000 r-xp b7f29000 00:00 0 [vdso] > b7f2a000-b7f44000 r-xp 00000000 08:06 2335045 /lib/ld-2.7.so > b7f44000-b7f46000 rw-p 00019000 08:06 2335045 /lib/ld-2.7.so > bfb51000-bfb66000 rw-p bffeb000 00:00 0 [stack] > ********************************************************************************* > UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for > details): > --------------------------------------------------------------------------------------- > *******Error generating Fortran stubs: Error running bfort Aborted******* > ********************************************************************************* > > Matt > >
