On 12/5/16 3:28 PM, Matthew Knepley wrote:
On Mon, Dec 5, 2016 at 1:32 PM, Emil Constantinescu
<[email protected] <mailto:[email protected]>> wrote:

    This was introduced to allow for full flexibility in ARKIMEX: i.e.,
    use IMEX or just the implicit part. It makes a difference whether
    the equation is implicit F(u,u_dot) = 0 (possibly a DAE), or just
    u_dot=f(u). The former has more restrictions and the algorithm is a
    bit more costly and complicated.

    TS_EQ_UNSPECIFIED reverts to the original use of ARKIMEX: u_dot =
    f(u) + g(u).

    Additional types are introduced for future use.


This is not a useful answer since it gives us no idea how to procede.
Its more like an encyclopedia entry.

I guess I don't understand the question. This setting is used only in -ts_type arkimex because it has implications to how the equation is interpreted -- see above; the user is not required to set it and we are not going to do so. This setting is not meant to be used as a selection tool. We rely on the user to use the appropriate solver. E.g., if the equation is implicit the user should not use explicit RK and so on...

Emil

   Matt



    Emil


    On 12/5/16 10:26 AM, Brad Aagaard wrote:

        Matt and the rest of the PETSc developers,

        This issue is not whether the TS is linear or nonlinear, but
        whether it
        is explicit or implicit. As far as I can tell only TS type
        Implicit-Explicit Runge Kutta makes use of the equation_type.

        The equations types defined in petscts.h are:

          TS_EQ_UNSPECIFIED               = -1,
          TS_EQ_EXPLICIT                  = 0,
          TS_EQ_ODE_EXPLICIT              = 1,
          TS_EQ_DAE_SEMI_EXPLICIT_INDEX1  = 100,
          TS_EQ_DAE_SEMI_EXPLICIT_INDEX2  = 200,
          TS_EQ_DAE_SEMI_EXPLICIT_INDEX3  = 300,
          TS_EQ_DAE_SEMI_EXPLICIT_INDEXHI = 500,
          TS_EQ_IMPLICIT                  = 1000,
          TS_EQ_ODE_IMPLICIT              = 1001,
          TS_EQ_DAE_IMPLICIT_INDEX1       = 1100,
          TS_EQ_DAE_IMPLICIT_INDEX2       = 1200,
          TS_EQ_DAE_IMPLICIT_INDEX3       = 1300,
          TS_EQ_DAE_IMPLICIT_INDEXHI      = 1500

        For PyLith we would like the TS implementation (type) to set the
        equation type so we can detect whether the user has specified an
        implicit or explicit algorithm and set the residual and Jacobian
        functions appropriately. For example, the user may want to solve the
        linear elasticity equation for a quasi-static problem with
        implicit time
        stepping or a dynamic problem with explicit time stepping.

        Brad

        On 12/03/2016 12:20 PM, Matthew Knepley wrote:

            On Sat, Dec 3, 2016 at 2:18 PM, Barry Smith
            <[email protected] <mailto:[email protected]>
            <mailto:[email protected] <mailto:[email protected]>>> wrote:


                > On Dec 3, 2016, at 11:58 AM, Matthew Knepley
            <[email protected] <mailto:[email protected]>
            <mailto:[email protected] <mailto:[email protected]>>> wrote:
                >
                > Right now, TS just leaves the equation type as
            undetermined, and
            never queries it except for the IMEX methods. This seems really
            strange to me. If we choose a linear TS solver, shouldn't it
            set the
            type to LINEAR, and likewise for nonlinear? Then a user
            could query
            this for information. We want to do just that in PyLith.

                  Is your concern that many of the examples never bother
            to set the
                type?


            Yes, since I want to query this to see what formulation the
            user expects.


                Or that not enough error checking is done that the set
            type works
                with solution method selected by the user?


            No


                I think these are just oversights and you should go
            ahead and add
                these in the examples and code where appropriate.


            Will do.

               Matt



                   Barry

                >
                >    Matt
                >
                > --
                > What most experimenters take for granted before they
            begin their
                experiments is infinitely more interesting than any
            results to which
                their experiments lead.
                > -- Norbert Wiener




            --
            What most experimenters take for granted before they begin their
            experiments is infinitely more interesting than any results
            to which
            their experiments lead.
            -- Norbert Wiener





--
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which
their experiments lead.
-- Norbert Wiener

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