On Mac - with prgmatic 'master' - I get: /usr/local/Cellar/cmake/3.7.1/bin/cmake -E cmake_link_script CMakeFiles/jpeg2mesh.dir/link.txt --verbose=1 /usr/bin/g++ -fstack-protector -g -std=c++11 -Wno-literal-suffix -Wno-deprecated -DEIGEN_NO_DEBUG -Wl,-search_paths_first -Wl,-headerpad_max_install_names CMakeFiles/jpeg2mesh.dir/tools/jpeg2mesh.cpp.o CMakeFiles/jpeg2mesh.dir/src/mpi_tools.cpp.o CMakeFiles/jpeg2mesh.dir/src/ticker.cpp.o -o bin/jpeg2mesh -lrt [ 92%] Linking CXX executable bin/coarsen_mesh_3d /usr/local/Cellar/cmake/3.7.1/bin/cmake -E cmake_link_script CMakeFiles/coarsen_mesh_3d.dir/link.txt --verbose=1 /usr/bin/g++ -fstack-protector -g -std=c++11 -Wno-literal-suffix -Wno-deprecated -DEIGEN_NO_DEBUG -Wl,-search_paths_first -Wl,-headerpad_max_install_names CMakeFiles/coarsen_mesh_3d.dir/tools/coarsen_mesh_3d.cpp.o CMakeFiles/coarsen_mesh_3d.dir/src/generate_Steiner_ellipse_3d.cpp.o CMakeFiles/coarsen_mesh_3d.dir/src/mpi_tools.cpp.o CMakeFiles/coarsen_mesh_3d.dir/src/ticker.cpp.o -o bin/coarsen_mesh_3d -lrt [100%] Linking CXX shared library lib/libpragmatic.dylib <snip> ld: library not found for -lrt clang: error: linker command failed with exit code 1 (use -v to see invocation)
Satish On Wed, 18 Jan 2017, Matthew Knepley wrote: > Yep, I am updating that (since it pointed to a branch that got munged), and > in doing so I wanted o fix this aswell. > > Matt > > On Wed, Jan 18, 2017 at 10:32 AM, Satish Balay <[email protected]> wrote: > > > BTW: wrong self.gitcommit in pragmatic.py? > > > > Satish > > > > ------- > > > > > > balay@asterix /home/balay/petsc (master=) > > $ ./configure --with-mpi=0 --download-metis --download-eigen > > --download-pragmatic PETSC_ARCH=arch-pragmatic > > ============================================================ > > =================== > > Configuring PETSc to compile on your system > > ============================================================ > > =================== > > =============================================================================== > > > > Trying to download hg://https://bitbucket.org/ > > eigen/eigen/ for EIGEN > > ============================== > > ================================================= > > > > > > =============================================================================== > > > > Configuring EIGEN with cmake, this may take several > > minutes > > ============================== > > ================================================= > > > > > > =============================================================================== > > > > Compiling and installing EIGEN; this may take several > > minutes > > ============================== > > ================================================= > > > > > > =============================================================================== > > > > Trying to download git://https://bitbucket.org/ > > petsc/pkg-metis.git for METIS > > ============================== > > ================================================= > > > > > > =============================================================================== > > > > Configuring METIS with cmake, this may take several > > minutes > > ============================== > > ================================================= > > > > > > =============================================================================== > > > > Compiling and installing METIS; this may take several > > minutes > > ============================== > > ================================================= > > > > > > =============================================================================== > > > > Trying to download git://https://github.com/ > > meshadaptation/pragmatic.git for PRAGMATIC > > ============================== > > ================================================= > > > > > > > > ************************************************************ > > ******************* > > UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for > > details): > > ------------------------------------------------------------ > > ------------------- > > Unable to checkout commit: 2efa91b32a3b9954083ddf96f2ee81889906543c in > > repository: /home/balay/petsc/arch-pragmatic/externalpackages/ > > git.pragmatic. > > Perhaps its a git error! > > ************************************************************ > > ******************* > > > > > > > > >
