You are right. Here is what I got
timac> make getincludedirs getlinklibs -I/Data/Poub1/petsc-3.1-p5/macx/include -I/Data/Poub1/petsc-3.1-p5/include -I/Data/Poub1/petsc-3.1-p5/macx/include -L/Data/Poub1/petsc-3.1-p5/macx/lib -L/Data/Poub1/petsc-3.1-p5/macx/lib -L/Data/Poub1/petsc-3.1-p5/macx/lib -lpetsc -L/usr/X11R6/lib -lX11 -L/Data/Poub1/petsc-3.1-p5/macx/lib -lparmetis -lmetis -lflapack -lfblas -L/Data/Poub1/petsc-3.1-p5/macx/lib -L/usr/lib/gcc/i686-apple-darwin10/4.2.1/x86_64 -L/usr/lib/i686-apple-darwin10/4.2.1 -L/opt/intel/Compiler/11.1/088/lib -L/opt/intel/Compiler/11.1/088/Frameworks/mkl/lib/em64t -L/usr/lib/gcc/i686-apple-darwin10/4.2.1 -ldl -lpmpich -lmpich -lSystem -lmpichf90 -lifport -lifcore -limf -lsvml -lipgo -lgcc_s.10.5 -lSystemStubs -lmx -lirc -lpthread -ldl -lpmpich -lmpich -lSystem -ldl What does it mean please for me to change in my makefiles ? Do you mean that I should remove any link other than -lpetsc ? Great thanks Tahar Le 12 nov. 2010 ? 18:26, Satish Balay a ?crit : > Looks like you are not using PETSc makefiles - and upgrading from > older release to petsc-3.1 > > Currently there is only one library for petsc [-lpetsc] > > Check: > cd $PETSC_DIR > make getincludedirs getlinklibs > > Satish > > On Fri, 12 Nov 2010, Tahar Amari wrote: > >> Many thanks. This is solved. >> >> Now at link I have the library not found. Any idea ? >> >> >> -L/usr/local/petsc/macx/lib -lpetscsnes -lpetscvec -lpetscmat -lpetsccontrib >> -lpetscts -lpetscdm -lpetscksp -lpetsc -lmpich -lpmpich -lfmpich -lmpichf90 >> -lparmetis -lmetis -lfblas -lflapack >> ld: library not found for -lpetscsnes >> >> >> Tahar >> >> >> Le 12 nov. 2010 ? 18:17, Satish Balay a ?crit : >> >>> Looks like this is related to the following: >>> http://www.mcs.anl.gov/petsc/petsc-as/documentation/changes/31.html >>> # petsc.h and petscdef.h are replaced with petscsys.h and petscsysdef.h; >>> while petsc.h now includes ALL PETSc include files. >>> >>> Try removing all includes other than 'petsc.h' from your code. >>> >>> Satish >>> >>> On Fri, 12 Nov 2010, Tahar Amari wrote: >>> >>>> Hello, >>>> >>>> While compiling one of my code with ifort , I have the following error >>>> pointing >>>> towards petscvec.h . >>>> >>>> Any idea about this posssible kind of error please ? Any option of ifort >>>> to use ? >>>> >>>> Many thanks >>>> >>>> Tahar >>>> >>>> >>>> ifort -assume byterecl -I/usr/local/petsc/ -I/usr/local/petsc//include >>>> -I/usr/local/petsc//include/finclude -I/usr/local/petsc//macx/include >>>> -I/usr/X11R6/include/X11 -DPETSC_HAVE_PARMETIS -DPETSC_USE_DEBUG >>>> -DPETSC_USE_LOG -DPETSC_USE_BOPT_g -DPETSC_USE_STACK -DPETSC_AVOID_MPIF_H >>>> -c petsc.fpp >>>> /usr/local/petsc//include/finclude/petscvec.h(10): error #6418: This name >>>> has already been assigned a data type. [NORM_1] >>>> integer(kind=selected_int_kind(5)) NORM_1 >>>> >>>> >>>> >>>> -------------------------------------------- >>>> T. Amari >>>> Centre de Physique Theorique >>>> Ecole Polytechnique >>>> 91128 Palaiseau Cedex France >>>> tel : 33 1 69 33 42 52 >>>> fax: 33 1 69 33 49 49 >>>> email: <mailto:amari at cpht.polytechnique.fr> >>>> URL : http://www.cpht.polytechnique.fr/cpht/amari >>>> >>>> >>>> >>>> >>>> >>> >> >> -------------------------------------------- >> T. Amari >> Centre de Physique Theorique >> Ecole Polytechnique >> 91128 Palaiseau Cedex France >> tel : 33 1 69 33 42 52 >> fax: 33 1 69 33 49 49 >> email: <mailto:amari at cpht.polytechnique.fr> >> URL : http://www.cpht.polytechnique.fr/cpht/amari >> >> >> >> >> -------------------------------------------- T. Amari Centre de Physique Theorique Ecole Polytechnique 91128 Palaiseau Cedex France tel : 33 1 69 33 42 52 fax: 33 1 69 33 49 49 email: <mailto:amari at cpht.polytechnique.fr> URL : http://www.cpht.polytechnique.fr/cpht/amari -------------- next part -------------- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-users/attachments/20101112/a34f4132/attachment-0001.htm>
