I am having trouble with the make test once petsc configure and I have run make all. The error is as follows:
Running test examples to verify correct installation Using PETSC_DIR=/home/porterma/Applications/petsc-dev and PETSC_ARCH=linux-gnu-c-debug C/C++ example src/snes/examples/tutorials/ex19 run successfully with 1 MPI process C/C++ example src/snes/examples/tutorials/ex19 run successfully with 2 MPI processes --------------Error detected during compile or link!----------------------- See http://www.mcs.anl.gov/petsc/documentation/faq.html /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials ex5f --------------------------------------------------------------------------- /home/porterma/Applications/petsc-dev/linux-gnu-c-debug/bin/mpif90 -c -Wall -Wno-unused-variable -g -I/home/porterma/Applications/petsc-dev/include -I/home/porterma/Applications/petsc-dev/linux-gnu-c-debug/include -o ex5f.o ex5f.F Warning: Nonconforming tab character in column 1 of line 3099 Warning: Nonconforming tab character in column 1 of line 5574 Warning: Nonconforming tab character in column 1 of line 7846 Warning: Nonconforming tab character in column 1 of line 10114 Warning: Nonconforming tab character in column 1 of line 12423 /home/porterma/Applications/petsc-dev/linux-gnu-c-debug/bin/mpif90 -Wall -Wno-unused-variable -g -o ex5f ex5f.o -L/home/porterma/Applications/petsc-dev/linux-gnu-c-debug/lib -lpetsc -lpthread -Wl,-rpath,/home/porterma/Applications/petsc-dev/linux-gnu-c-debug/lib -lflapack -lfblas -lhdf5_fortran -lhdf5 -lhdf5hl_fortran -lhdf5_hl -lz -L/usr/lib/gcc/x86_64-redhat-linux6E/4.4.6 -lmpi_f90 -lmpi_f77 -lgfortran -lm -lm -lm -lm -lm -lm -lm -lm -lmpi_cxx -lstdc++ -lmpi_cxx -lstdc++ -ldl -lmpi -lrt -lnsl -lutil -lgcc_s -lpthread -ldl ex5f.o: In function `MAIN__': /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:94: undefined reference to `snescreate_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:112: undefined reference to `dmcreateglobalvector_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:113: undefined reference to `vecduplicate_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:124: undefined reference to `dmdagetcorners_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:126: undefined reference to `dmdagetghostcorners_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:145: undefined reference to `snessetdm_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:153: undefined reference to `snessetfromoptions_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:165: undefined reference to `snesgetiterationnumber_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:177: undefined reference to `vecdestroy_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:178: undefined reference to `vecdestroy_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:179: undefined reference to `snesdestroy_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:180: undefined reference to `dmdestroy_' ex5f.o: In function `forminitialguess_': /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:226: undefined reference to `dmgetlocalvector_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:239: undefined reference to `dmlocaltoglobalbegin_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:240: undefined reference to `dmlocaltoglobalend_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:241: undefined reference to `dmrestorelocalvector_' ex5f.o: In function `formjacobianlocal_': /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:462: undefined reference to `matsetvalueslocal_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:477: undefined reference to `matsetvalueslocal_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:481: undefined reference to `matassemblybegin_' /home/porterma/Applications/petsc-dev/src/snes/examples/tutorials/ex5f.F:482: undefined reference to `matassemblyend_' collect2: ld returned 1 exit status make[3]: [ex5f] Error 1 (ignored) /bin/rm -f ex5f.o Completed test examples Any suggestions would be helpful. Thanks. porter -- Mark L. Porter, Ph.D. Earth& Environmental Sciences (EES-14) Los Alamos National Laboratory work: 505.606.1971 cell: 541.517.2761 porterma at lanl.gov -------------- next part -------------- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-users/attachments/20121004/968f12cf/attachment.html>
