Fixed in master and next. Thanks for reporting it. Barry
BTW: I also updated some routines in moab.cxx for changes in how we handle setfromoptions in master > On Jan 28, 2015, at 7:39 PM, Vijay S. Mahadevan <[email protected]> wrote: > > With the current master, when using a prefix, configuration fails with > the following error message. I've not attached configure.log since its > around 7MB (but definitely can send that if that helps further > deciphering the issue). The problem here seems to be that > $PREFIX/include is not created (while $PREFIX/lib is created > explicitly with mkdir -p). If I manually create $PREFIX/include and > rerun configure, everything proceeds fine. Minor annoyance. > > I am not sure whether I just pulled in between merges though. My > latest hash: c04667f413dc6e46059f28faddb2b19f70ad4cfd. > > Command: > ./configure --CFLAGS="-O2 -mtune=generic" > --CPPFLAGS=-I/usr/software/metis-5.1.0/include --CXXFLAGS="-O2 > -mtune=generic" --FFLAGS="-O2 -mtune=generic" > --LDFLAGS="-L/usr/software/moab/dev/optimized/lib > -L/usr/software/pnetcdf-1.3.1/lib -L/usr/software/zoltan-3.6/lib > -L/usr/software/ptscotch-6.0/lib -L/usr/software/parmetis-4.0.3/lib > -L/usr/software/metis-5.1.0/lib" --LIBS="-lpnetcdf -lparmetis -lmetis > -lm" --download-hypre=yes --download-mumps=yes > --download-scalapack=yes --download-suitesparse=yes > --prefix=/usr/software/petsc/dev/ubuntu_standalone_opt > --with-blas-lapack-dir=/usr > --with-boost-dir=/usr/software/boost/current --with-clanguage=C++ > --with-cmake=/usr/software/cmake/bin/cmake --with-cuda=0 > --with-debugging=0 --with-fortran-interfaces=1 > --with-fortran-kernels=1 --with-fortran=1 > --with-hdf5-dir=/usr/software/hdf5-1.8.11 > --with-metis-dir=/usr/software/metis-5.1.0 > --with-moab-include=/usr/software/moab/dev/optimized/include > --with-moab-lib="-lMOAB -liMesh -lmbcoupler -lzoltan -lptscotch > -lptscotcherr -lptscotcherrexit -lscotch -lscotcherr -lscotcherrexit > -lz -lm " --with-mpi-dir=/usr/software/mpich-3.0.4 > --with-netcdf-dir=/usr/software/netcdf-4.3.0 --with-openmp=0 > --with-parmetis-dir=/usr/software/parmetis-4.0.3 --with-pic=1 > --with-ptscotch-include=/usr/software/ptscotch-6.0/include > --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr > -lptscotcherrexit -lscotch -lscotcherr -lscotcherrexit -lz -lm" > --with-shared-libraries=1 PETSC_ARCH=ubuntu_standalone_opt > > Error: > ******************************************************************************* > UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log > for details): > ------------------------------------------------------------------------------- > Error running make on MUMPS: Could not execute "mkdir -p > /usr/software/petsc/dev/ubuntu_standalone_opt/lib && cd > /home/vijaysm/code/petsc/ubuntu_standalone_opt/externalpackages/MUMPS > && cp -f lib/*.* /usr/software/petsc/dev/ubuntu_standalone_opt/lib/. > && cp -f include/*.* > /usr/software/petsc/dev/ubuntu_standalone_opt/include/.": > cp: target '/usr/software/petsc/dev/ubuntu_standalone_opt/include/.' > is not a directory > ******************************************************************************* > > Vijay
