On Wed, 1 Apr 2015, David Knezevic wrote: > On Wed, Apr 1, 2015 at 11:46 PM, Barry Smith <[email protected]> wrote: > > > > > Send configure.log from the failed configure > > > > > It's attached. >
Same issue as before - for some reason mpicxx is not finding math symbols in -lm Satish ----- Executing: mpicxx -o /tmp/petsc-rljk4x/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -O0 /tmp/petsc-rljk4x/config.libraries/conftest.o -Wl,-rpath,/home/dknez/software/petsc-3.5.2/arch-linux2-cxx-debug/lib64 -L/home/dknez/software/petsc-3.5.2/arch-linux2-cxx-debug/lib64 -lsuperlu_dist_3.3 -Wl,-rpath,/opt/intel/system_studio_2015.2.050/mkl/lib/intel64 -L/opt/intel/system_studio_2015.2.050/mkl/lib/intel64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread -lm -Wl,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.8 -L/usr/lib/gcc/x86_64-linux-gnu/4.8 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpi_f90 -lmpi_f77 -lgfortran -lm -Wl,-rpath,/usr/lib/openmpi/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.8 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -Wl,-rpath,/home/dknez/software/petsc-3.5.2/arch-linux2-cxx-debug/lib -L/home/dknez/software/petsc-3.5.2/arch-linux2-cxx-debug/lib -lparmetis -Wl,-rpath,/home/dknez/software/petsc-3.5.2/arch-linux2-cxx-debug/lib -L/home/dknez/software/petsc-3.5.2/arch-linux2-cxx-debug/lib -lmetis -lm -lm -Wl,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.8 -L/usr/lib/gcc/x86_64-linux-gnu/4.8 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -ldl -lmpi -lhwloc -lgcc_s -lpthread -ldl Possible ERROR while running linker: exit code 256 stderr: /opt/intel/system_studio_2015.2.050/mkl/lib/intel64/libmkl_core.so: undefined reference to `logf' /opt/intel/system_studio_2015.2.050/mkl/lib/intel64/libmkl_core.so: undefined reference to `atan2' /opt/intel/system_studio_2015.2.050/mkl/lib/intel64/libmkl_core.so: undefined reference to `sin' /opt/intel/system_studio_2015.2.050/mkl/lib/intel64/libmkl_core.so: undefined reference to `fabs' /opt/intel/system_studio_2015.2.050/mkl/lib/intel64/libmkl_core.so: undefined reference to `exp' /opt/intel/system_studio_2015.2.050/mkl/lib/intel64/libmkl_core.so: undefined reference to `cos' /opt/intel/system_studio_2015.2.050/mkl/lib/intel64/libmkl_core.so: undefined reference to `sqrt' /opt/intel/system_studio_2015.2.050/mkl/lib/intel64/libmkl_intel_lp64.so: undefined reference to `log' /opt/intel/system_studio_2015.2.050/mkl/lib/intel64/libmkl_core.so: undefined reference to `pow' /opt/intel/system_studio_2015.2.050/mkl/lib/intel64/libmkl_core.so: undefined reference to `log10' /opt/intel/system_studio_2015.2.050/mkl/lib/intel64/libmkl_core.so: undefined reference to `ceil' /opt/intel/system_studio_2015.2.050/mkl/lib/intel64/libmkl_core.so: undefined reference to `expf'
