[petsc-users] petsc4py --with-64-bit-indices

[Aurelien Ponte]

Hi all,

I am trying to install petsc4py and petsc with the --with-64-bit-indices 
option.

I followed the pip install described on the petsc4py bitbucket with some 
slight modifications:

module load python/2.7.10_gnu-4.9.2
wget https://bootstrap.pypa.io/get-pip.py
python get-pip.py --user
setenv MPICC mpiicc
pip install --user --upgrade mpi4py
pip install --user --upgrade numpy
pip install --user petsc petsc4py --install-option="--with-64-bit-indices"

but I do get the error copied below.

Any ideas on what I could do?

Should I try to use a different method of install?

thanks

aurelien




service7>479% pip install --user petsc petsc4py 
--install-option="--with-64-bit-indices"
/home1/caparmor/aponte/.local/lib/python2.7/site-packages/pip/commands/install.py:194: 
UserWarning: Disabling all use of wheels due to the use of 
--build-options / --global-options / --install-options.
  cmdoptions.check_install_build_global(options)
Collecting petsc
  Downloading petsc-3.7.2.1.tar.gz (8.7MB)
    100% |################################| 8.7MB 116kB/s
Collecting petsc4py
  Downloading petsc4py-3.7.0.tar.gz (1.7MB)
    100% |################################| 1.7MB 415kB/s
Requirement already satisfied: numpy in 
/home1/caparmor/aponte/.local/lib/python2.7/site-packages (from petsc4py)
Skipping bdist_wheel for petsc, due to binaries being disabled for it.
Skipping bdist_wheel for petsc4py, due to binaries being disabled for it.
Installing collected packages: petsc, petsc4py
  Running setup.py install for petsc ... error
    Complete output from command 
/appli/python/2.7.10_gcc-4.9.2/python-2.7.10/bin/python -u -c "import 
setuptools, 
tokenize;__file__='/tmp/pip-build-3C49gO/petsc/setup.py';f=getattr(tokenize, 
'open', open)(__file__);code=f.read().replace('\r\n', 
'\n');f.close();exec(compile(code, __file__, 'exec'))" install --record 
/tmp/pip-iuRtIV-record/install-record.txt 
--single-version-externally-managed --compile --with-64-bit-indices 
--user --prefix=:
    usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
       or: -c --help [cmd1 cmd2 ...]
       or: -c --help-commands
       or: -c cmd --help

    error: option --with-64-bit-indices not recognized

    ----------------------------------------
Command "/appli/python/2.7.10_gcc-4.9.2/python-2.7.10/bin/python -u -c 
"import setuptools, 
tokenize;__file__='/tmp/pip-build-3C49gO/petsc/setup.py';f=getattr(tokenize, 
'open', open)(__file__);code=f.read().replace('\r\n', 
'\n');f.close();exec(compile(code, __file__, 'exec'))" install --record 
/tmp/pip-iuRtIV-record/install-record.txt 
--single-version-externally-managed --compile --with-64-bit-indices 
--user --prefix=" failed with error code 1 in /tmp/pip-build-3C49gO/petsc/


--
Aurélien Ponte
Tel: (+33) 2 98 22 40 73
Fax: (+33) 2 98 22 44 96
UMR 6523, IFREMER
ZI de la Pointe du Diable
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29280 Plouzané