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> > gmake[3]: *** No rule to make target '/$NETWORK$/users/$USERNAME$/NumLib/petsc-3.21.1/src/sys/f90-mod/petscsysmod.F90', needed by 'gnu-opt/obj/src/sys/f90-mod/petscsysmod.o'. Stop.
Why is the above source file missing? Make sure your petsc source tree is not corrupted. Best to start with a fresh tarball [or git repo] - and rebuild. And if you still have issues, send us the logs Satish On Thu, 13 Jun 2024, Barry Smith wrote: > > Please send configure.log and make.log to [email protected] without the exact details we cannot determine what has gone wrong. > > > > On Jun 13, 2024, at 6:33 PM, s.pradeep kumar <[email protected]> wrote: > > > > This Message Is From an External Sender > > This message came from outside your organization. > > Dear Petsc Development Team, > > > > I am encountering an issue while trying to build Petsc library in our Cray Cluster. Despite loading appropriate gcc and cray-mpich modules and successfully configuring Petsc, I receive the following error (see A1). I have also attached petsc configure statement (see A2) and snippet of configure log (see A3). > > > > Could you please provide assistance in resolving this build issue? Any insights or additional steps I might take to diagnose and fix the problem would be greatly appreciated. > > > > Thank you for your support > > > > Regards, > > > > Pradeep > > > > > > > > > > A1.Error from make.log: > > > > > > ========================================== > > /usr/bin/gmake --print-directory -f gmakefile -j88 -l272.0 --output-sync=recurse V= libs > > gmake[3]: *** No rule to make target '/$NETWORK$/users/$USERNAME$/NumLib/petsc-3.21.1/src/sys/f90-mod/petscsysmod.F90', needed by 'gnu-opt/obj/src/sys/f90-mod/petscsysmod.o'. Stop. > > gmake[2]: *** [/users/$USERNAME$/NumLib/petsc-3.21.1/lib/petsc/conf/rules_doc.mk:5 <https://urldefense.us/v3/__http://rules_doc.mk:5__;!!G_uCfscf7eWS!bzt6Ug_Q99IAVZ3YC6uReptvtUbsmvjz5BTANuRoXR9Ap8p-lmK9vgI05Bc1978HvYN2t63u7h4OQCvKWLfZ2bAtjgAjZzjQ$>:libs] Error 2 > > **************************ERROR************************************* > > Error during compile, check gnu-opt/lib/petsc/conf/make.log > > Send it and gnu-opt/lib/petsc/conf/configure.log to [email protected] <mailto:[email protected]> > > ******************************************************************** > > Finishing make run at Thu, 13 Jun 2024 11:42:44 -0600 > > > > A2.Configure Statement: > > > > ./configure --with-scalar-type=real --with-precision=double --download-metis=$metis_path --download-metis-use-doubleprecision=1 --download-parmetis=$parmetis_path --with-cmake=1 --with-mpi-dir=$MPI_DIR --download-fblaslapack=$fblaslapack_path --with-debugging=0 COPTFLAGS=-O2 FOPTFLAGS=-O2 > > > > Where the paths are defined: > > > > fblaslapack_path="/users/$USERNAME$/NumLib/ExternalPackages/petsc-pkg-fblaslapack-e8a03f57d64c.tar.gz" > > metis_path="/users/$USERNAME$/NumLib/ExternalPackages/petsc-pkg-metis-69fb26dd0428.tar.gz" > > parmetis_path="/users/$USERNAME$/NumLib/ExternalPackages/petsc-pkg-parmetis-f5e3aab04fd5.tar.gz" > > > > MPI_DIR=${CRAY_MPICH_PREFIX} > > > > > > > > > > A3. Snippets From configure.log: > > > > --------------------------------------------------------------------------------------------- > > PETSc: > > Build : Set default architecture to gnu-opt in lib/petsc/conf/petscvariables > > File creation : Created gnu-opt/lib/petsc/conf/reconfigure-gnu-opt.py for automatic reconfiguration > > Framework: > > RDict update : Substitutions were stored in RDict with parent None > > File creation : Created makefile configure header gnu-opt/lib/petsc/conf/petscvariables > > File creation : Created makefile configure header gnu-opt/lib/petsc/conf/petscrules > > File creation : Created configure header gnu-opt/include/petscconf.h > > File creation : Created C specific configure header gnu-opt/include/petscfix.h > > File creation : Created configure pkg header gnu-opt/include/petscpkg_version.h > > Compilers: > > C Compiler: /opt/cray/pe/mpich/8.1.28/ofi/gnu/12.3/bin/mpicc -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -Wno-lto-type-mismatch -Wno-stringop-overflow -fstack-protector -fvisibility=hidden -O2 > > Version: gcc (GCC) 12.2.0 20220819 (HPE) > > C++ Compiler: /opt/cray/pe/mpich/8.1.28/ofi/gnu/12.3/bin/mpicxx -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -Wno-lto-type-mismatch -Wno-psabi -fstack-protector -fvisibility=hidden -g -O -std=gnu++20 -fPIC > > Version: g++ (GCC) 12.2.0 20220819 (HPE) > > Fortran Compiler: /opt/cray/pe/mpich/8.1.28/ofi/gnu/12.3/bin/mpif90 -fPIC -Wall -ffree-line-length-none -ffree-line-length-0 -Wno-lto-type-mismatch -Wno-unused-dummy-argument -O2 > > Version: GNU Fortran (GCC) 12.2.0 20220819 (HPE) > > Linkers: > > Shared linker: /opt/cray/pe/mpich/8.1.28/ofi/gnu/12.3/bin/mpicc -shared -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -Wno-lto-type-mismatch -Wno-stringop-overflow -fstack-protector -fvisibility=hidden -O2 > > Dynamic linker: /opt/cray/pe/mpich/8.1.28/ofi/gnu/12.3/bin/mpicc -shared -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -Wno-lto-type-mismatch -Wno-stringop-overflow -fstack-protector -fvisibility=hidden -O2 > > Libraries linked against: -lquadmath -ldl > > BlasLapack: > > Libraries: -Wl,-rpath,/users/$USERNAME$/NumLib/petsc-3.21.1/gnu-opt/lib -L/users/$USERNAME$ /NumLib/petsc-3.21.1/gnu-opt/lib -lflapack -lfblas > > uses 4 byte integers > > MPI: > > Version: 3 > > Includes: -I/opt/cray/pe/mpich/8.1.28/ofi/gnu/12.3/include > > mpiexec: /bin/false > > Implementation: mpich3 > > MPICH_NUMVERSION: 30400002 > > X: > > Libraries: -lX11 > > python: > > Executable: /usr/bin/python3 > > pthread: > > Libraries: -lpthread > > cmake: > > Version: 3.23.1 > > Executable: /usr/projects/hpcsoft/tce/23-03/cray-sles15-x86_64_v3-slingshot-none/packages/cmake/cmake-3.23.1/bin/cmake > > fblaslapack: > > metis: > > Version: 5.1.0 > > Includes: -I/users/$USERNAME$/NumLib/petsc-3.21.1/gnu-opt/include > > Libraries: -Wl,-rpath,/users/$USERNAME$/NumLib/petsc-3.21.1/gnu-opt/lib -L/users/$USERNAME$/NumLib/petsc-3.21.1/gnu-opt/lib -lmetis > > parmetis: > > Version: 4.0.3 > > Includes: -I/users/$USERNAME$/NumLib/petsc-3.21.1/gnu-opt/include > > Libraries: -Wl,-rpath,/users/$USERNAME$/NumLib/petsc-3.21.1/gnu-opt/lib -L/users/$USERNAME$/NumLib/petsc-3.21.1/gnu-opt/lib -lparmetis > > regex: > > bison: > > Version: 3.0 > > Executable: /usr/bin/bison > > PETSc: > > Language used to compile PETSc: C > > PETSC_ARCH: gnu-opt > > PETSC_DIR: /users/$USERNAME$/NumLib/petsc-3.21.1 > > Prefix: <inplace installation> > > Scalar type: real > > Precision: double > > Support for __float128 > > Integer size: 4 bytes > > Single library: yes > > Shared libraries: yes > > Memory alignment from malloc(): 16 bytes > > Using GNU make: /usr/bin/gmake > > xxx=======================================================================================xxx > > Configure stage complete. Now build PETSc libraries with: > > make PETSC_DIR=/users/$USERNAME$/NumLib/petsc-3.21.1 PETSC_ARCH=gnu-opt all > > xxx=======================================================================================xxx > > ================================================================================ > > Finishing configure run at Thu, 13 Jun 2024 11:42:35 -0600 > >
