> Why didn't rsync made the copies on master and replica same?

Because rsync was running with —size-only flag.

> I haven't looked in detail, but it sounds slightly risky proposition
> to manipulate the tuples by writing C functions of the form you have
> in your code.  I would have preferred some way to avoid this problem
> by ensuring that replicas are properly synced (complete data of master
> via WAL) or by disabling autovacuum.

Avoiding this problem is a good way. But what to do with already corrupted data?
Can you explain more what do you mean?

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