Max,

what do you think will be a proper fix for this? I cannot see if this is a vm 
problem or not.

Norbert

> Am 14.07.2018 um 08:25 schrieb Max Leske <[email protected]>:
> 
> Hi Nicolas,
> 
> The PR you are referring [1] to concerns a missing fflush() when truncating a 
> file. I believe that is a different case to this one, as a) the file is not 
> truncated and b) in the case of truncation it is an explicit requirement that 
> the file be empty before the first write happens. In our case, and in 
> general, it depends on the situation whether flushing must occur immediately, 
> e.g. because the file will be read again immediately, or not, e.g. when 
> writing a data to a backup file.
> 
> Thanks for the pointer though.
> 
> 
> Cheers,
> Max
> 
> 
> [1] https://github.com/OpenSmalltalk/opensmalltalk-vm/pull/271
> 
>> On 12 Jul 2018, at 23:19, Nicolas Cellier wrote:
>> 
>> Isn't there a recent PR on opensmalltalk that address just this?
>> 
>>> Le jeu. 12 juil. 2018 à 23:16, Max Leske <[email protected]> a écrit :
>>> 
>>> Hi Norbert,
>>> 
>>> I was able to reproduce the problem and then identify the culprit,
>>> although what I don't yet understand is how this is related to the changes
>>> in Zinc.
>>> 
>>> Anyway, the problem is that the file stream isn't properly flushed in
>>> ZnUtils class>>streamFrom:to:size:. Adding outputStream flush as the last
>>> statement fixes your problem. Apparently, StandardFileStream /
>>> MultiByteFileStream perform a simple close() on the file which, according
>>> to the man page on close(), does *not* guarantee that the contents have
>>> all been written to file. In this case a flush is necessary because the
>>> entire file is immediately read again.
>>> 
>>> Here's a smaller test case for you to play with Sven:
>>> 
>>> ZnClient new
>>>    url: 'https://github.com/zweidenker/Parasol/archive/master.zip';
>>>    downloadTo: '/tmp/foobar.zip'.
>>> bytes := '/tmp/foobar.zip' asFileReference binaryReadStreamDo: [ :s | s 
>>> contents ].
>>> Transcript open; show: bytes size; cr.
>>> 5 seconds asDelay wait.
>>> Transcript show: ('/tmp/foobar.zip' asFileReference binaryReadStreamDo: [ 
>>> :s | s contents ]) size.
>>> 
>>> The output in the Transcript should be:
>>> 
>>> 315392
>>> 318420
>>> 
>>> Cheers,
>>> Max
>>> 
>>> On 12 Jul 2018, at 8:17, Norbert Hartl wrote:
>>> 
>>> Am 12.07.2018 um 08:05 schrieb Max Leske [email protected]:
>>> 
>>> On 11 Jul 2018, at 22:44, Norbert Hartl wrote:
>>> 
>>> Hi Max,
>>> 
>>> I constructed a case that fails exactly like I experience it. Could you
>>> try? Just unpack the attachment on a linux, set PHARO_VM env to your
>>> executable and execute build.sh
>>> 
>>> I will. Might take a couple of days though.
>>> 
>>> No problem. I‘m happy if you find time.
>>> 
>>> Norbert
>>> 
>>> Max
>>> 
>>> Norbert
>>> 
>>> Am 10.07.2018 um 09:17 schrieb Max Leske [email protected]:
>>> 
>>> On 10 Jul 2018, at 8:48, Norbert Hartl wrote:
>>> 
>>> Max,
>>> 
>>> thanks for taking the effort.
>>> 
>>> No worries.
>>> 
>>> Am 10.07.2018 um 08:37 schrieb Max Leske [email protected]:
>>> 
>>> I did my best to reproduce the issue but didn't have any luck. I really
>>> need access to a Linux VM to debug this. So I'm praying that Apple fixes
>>> the access restrictions to kernel extensions in their next beta...
>>> 
>>> BTW, Metacello uses ZnClient, which uses ZnFileSystemUtils, so there is
>>> indeed a chance that something goes wrong during download of the zip
>>> archive and that something may be tied to a difference in the versions of
>>> Zinc (although I still think that's unlikely).
>>> 
>>> Yes there is potential but I don‘t see it. I take a fresh 6.1 image and
>>> load my project into. I‘m not sure but I think zinc 2.9.2 is loaded rather
>>> early in that process. So I wonder why it does not go wrong in the first
>>> phase. And also not if I load the test group within the first phase.
>>> It must be either the second Metacello invocation or the stopping, copying
>>> and starting of the image.
>>> I try to isolate this case more and provide a script that goes wrong on my
>>> machine. But it will take some time because I needed to stop trying to
>>> solve this as I wasted nearly two days on that already.
>>> 
>>> Let me know once you have something and I'll try to help out.
>>> 
>>> Norbert
>>> 
>>> Max
>>> 
>>> On 9 Jul 2018, at 19:43, Norbert Hartl wrote:
>>> 
>>> Am 09.07.2018 um 19:10 schrieb Max Leske [email protected]:
>>> 
>>> I checked the Parasol Archive and it does not appear to be in Zip64 format
>>> (Metacello uses ZipArchive which can't cope with Zip64 but ZipArchive can
>>> read the Parasol zip). So my next guess is that there's either a problem
>>> with Metacello or Pharo in the way that ZipArchive is used (e.g. endianness
>>> problem or non-binary stream data). It would therefore be helpful to find
>>> out what happens in ZipArchive>>readFrom:, i.e. what kind of stream is
>>> passed / opened, is it binary, does the file exist and is it still the
>>> correct file.
>>> 
>>> I couldn’t see anything obvious. The file in the debug message exists, it
>>> is a readable zip file. The way Metacello uses it it is a
>>> StandardFileStream. It switches it to binary in the code.
>>> But the only difference between a working and non-working build is the
>>> upgrade to zinc 2.9.2.
>>> 
>>> Norbert
>>> 
>>> I'd debug it myself but I can't run VirtualBox at the moment because I'm
>>> on the macOS beta and it won't start...
>>> 
>>> Max
>>> 
>>> On 9 Jul 2018, at 18:31, Norbert Hartl wrote:
>>> 
>>> Hi Max,
>>> 
>>> Am 09.07.2018 um 18:18 schrieb Max Leske [email protected]:
>>> 
>>> Hi Norbert,
>>> 
>>> This is a bit of a guess, but it's possible that the archive that is
>>> downloaded from github is in Zip64 format and that the libraries for
>>> extracting Zip64 are missing on your Linux. That would of course contradict
>>> the experience that the same operation appears to work in 6.1.
>>> 
>>> to be honest I don’t know what Zip64 format is. I thought the Zip classes
>>> are pure smalltalk for unpacking.
>>> 
>>> Try extracting the archive manually on your Linux machine with the same
>>> method that Metacello uses (I assume, Metacello uses the ZipPlugin, which
>>> will probably use the system libraries).
>>> 
>>> I have no ZipPlugin as library in any of my vms.
>>> 
>>> But there are zips downloaded and unpacked. I start the image the first
>>> time loading all the code of my project. Then it is saved, copied to a new
>>> name and reopened to load the tests and then it fails. I did try to load
>>> the tests in the first run and then it works.
>>> 
>>> I’m running out of ideas
>>> 
>>> thanks,
>>> 
>>> Norbert
>>> 
>>> Cheers,
>>> Max
>>> 
>>> On 9 Jul 2018, at 17:14, Norbert Hartl wrote:
>>> 
>>> With the help of Esteban I got one step further. If I do
>>> 
>>> MCWorkingCopy
>>> managersForClass: ZnFileSystemUtils
>>> do: [ :each | each ancestry initialize ]
>>> 
>>> before loading my project it updates Zinc-FileSystem as well. Sadly it
>>> still does not work for me because I get
>>> 
>>> Loading baseline of BaselineOfMobilityMap...
>>> ...RETRY->BaselineOfParasol
>>> ...RETRY->BaselineOfParasol[31mError: can't find EOCD position
>>> 
>>> and I don’t know why. zip file is downloaded from github and present but
>>> it fails and only on my jenkins on linux. On my Mac this works.
>>> 
>>> I try a few things but then I’m back on pharo6.1 for the time being :(
>>> 
>>> Norbert
>>> 
>>> Am 07.07.2018 um 13:28 schrieb Norbert Hartl [email protected]:
>>> 
>>> Really? I thought the same but then I didn’t believe it works like that.
>>> 
>>> Anyway this would be very easy to solve. We just need to ask Sven if he is
>>> fine with doing an empty .16 version for Zinc-FileSystem and does an
>>> in-place version reset of 2.9.2 or a new 2.9.3. I’m not fully convinced
>>> that will solve it but the cost won’t be very high.
>>> 
>>> Norbert
>>> 
>>> Am 07.07.2018 um 13:22 schrieb Cyril Ferlicot [email protected]:
>>> 
>>> Need to investigate more. There are two .15 versions but there is 1 year
>>> in between (if you didn’t notice TheIntegratior.15 is from 2017). Just want
>>> to have more context information because I can only see that this is
>>> strange but lacking insight.
>>> 
>>> I’m trying to figure out why it does not update Zinc-FileSystem. No matter
>>> what I do I cannot get Metacello to load the newer package. That would fix
>>> the issue because I’m loading 2.9.2 which should have
>>> Zinc-FileSystem-SVC.15 and not stay on the one included in the image.
>>> 
>>> I think this is important for everyone that has a product based on 6.1 and
>>> that want to migrate someday to pharo7. This way it is impossible to do it
>>> step by step.
>>> 
>>> If there is a package .15 in the image and a package .15 in the repo, I
>>> think Metacello will not update because it rely on the numbers to know when
>>> to update. If it find a .15 and currently have a .15 I think Metacello will
>>> think they are at the same version.
>>> 
>>> Norbert
>>> 
>>> --
>>> Cyril Ferlicot
>>> https://ferlicot.fr
>>> 
>>> 
> 
> 
> 


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