-> > Traceback (most recent call last): -> > File "protest.py", line 123, in <module> -> > if do_test(sys.argv[2],sys.argv[3],sys.argv[4]): -> > File "protest.py", line 33, in do_test -> > m() -> > File "/result/pygr_megatest/src_save/pygr/tests/sequence_test.py", -> > line 88, in blast_test -> > minAlignSize=14,pIdentityMin=0.5) -> > File "pygr.cnestedlist.pyx", line 599, in -> > pygr.cnestedlist.NLMSASlice.edges -> > File "pygr.cnestedlist.pyx", line 831, in -> > pygr.cnestedlist.NLMSASlice.groupByIntervals -> > File "pygr.cnestedlist.pyx", line 882, in -> > pygr.cnestedlist.NLMSASlice.filterIvalConservation -> > TypeError: 'dict' object doesn't support item deletion -> -> This error message is puzzling. The Python 2.6 docs explicitly -> support the use of del on a dict object: -> "del d[key] -> Remove d[key] from d. Raises a KeyError if key is not in the map." -> -> Also, it's hard to see how all the megatests could pass if such a -> basic language feature were removed in 2.6. This message sounds like -> a bug to me... but whose bug? My first guess is that this might be a -> Python 2.6 bug, since it's still quite new...
This is almost certainly due to a Pyrex version upgrade; it's the same kind of error I tracked down for the seqdb cache. --titus -- C. Titus Brown, [EMAIL PROTECTED] --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "pygr-dev" group. To post to this group, send email to [email protected] To unsubscribe from this group, send email to [EMAIL PROTECTED] For more options, visit this group at http://groups.google.com/group/pygr-dev?hl=en -~----------~----~----~----~------~----~------~--~---
