On Jan 28, 2009, at 1:53 PM, Kenny Daily wrote:
>
> OK. These things make sense. However, I think what I'm doing is a
> little more complicated, and I've left out some of the important steps
> that may help explain. First, I'm sure that I'm using the pygr.Data
> object everytime...i.e. genome is always set by:
>
> genome = pygr.Data.getResource("Bio.Seq.Genome.YEAST.sacCer")
Kenny, could you check the c.sequence.path.db._persistent_id on the
case from your example that gives the KeyError? If this attribute is
missing, the data was *not* loaded with a pygr.Data ID. Let me know
what you find.
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