On Tue, Jul 14, 2009 at 03:13:23PM -0700, Christopher Lee wrote: -> On Jun 14, 2009, at 7:49 PM, C. Titus Brown wrote: -> > -> 2. handling of self-alignment in pairwise mode. We proposed -> > changing -> > -> pairwise mode to report self-alignments, rendering obsolete the -> > -> current annoying warning message. -> > -> > +1, will submit patch this week. -> -> I may have missed it, but did you ever submit this patch?
Hmm, no, I didn't. Whups. Am I correct that this boils down to setting bidirectionalRule=None in the NLMSA constructor? cheers, --titus -- C. Titus Brown, [email protected] --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "pygr-dev" group. To post to this group, send email to [email protected] To unsubscribe from this group, send email to [email protected] For more options, visit this group at http://groups.google.com/group/pygr-dev?hl=en -~----------~----~----~----~------~----~------~--~---
