On Jul 18, 2009, at 10:24 AM, C. Titus Brown wrote:
> If we don't want to add a general translation function, how about > adding > an NCBI-specific convenience function to translationDB? e.g. > > def translation_ncbi(seq, ncbi_frame): > """ > Translates the DNA sequence 'seq' in the given frame, using NCBI's > frame convention. > """ That seems fine to me. This way we can supply NCBI BLAST's standard for defining "frame", clearly labeled as such, without implying that we have chosen it as the one-and-only standard for defining frame in Pygr. Do you want to go ahead and add such a function? -- Chris --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "pygr-dev" group. To post to this group, send email to [email protected] To unsubscribe from this group, send email to [email protected] For more options, visit this group at http://groups.google.com/group/pygr-dev?hl=en -~----------~----~----~----~------~----~------~--~---
