Nat, Thanks for pointing this out. I had the exact same problem recently, but it seems to have been fixed when I reassigned the secondary structure manually (rather than relying on the built-in ss routine).
Felix -----Original Message----- From: Nat Echols [mailto:n...@bioinfo.mbb.yale.edu] Sent: Wednesday, July 16, 2003 9:57 PM To: PyMOL list Subject: [PyMOL] weird artifact with cylindrical helices I'm trying to make some figures for a review, and I'm seeing weird little partial spheres show up when I try to ray-trace a polymerase structure: http://bioinfo.mbb.yale.edu/people/nat/weird.png They're in the bottom third of the picture, and seem to show up in the same location in the structure no matter what orientation. Any idea what's causing these? I just gave up and used regular ribbons. ---------------------------------------------------------------------------- Nathaniel Echols Programmer n...@bioinfo.mbb.yale.edu Gerstein Lab 203-589-6765 Yale University ---------------------------------------------------------------------------- ------------------------------------------------------- This SF.net email is sponsored by: VM Ware With VMware you can run multiple operating systems on a single machine. WITHOUT REBOOTING! Mix Linux / Windows / Novell virtual machines at the same time. Free trial click here: http://www.vmware.com/wl/offer/345/0 _______________________________________________ PyMOL-users mailing list PyMOL-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/pymol-users LEGAL NOTICE Unless expressly stated otherwise, this message is confidential and may be privileged. It is intended for the addressee(s) only. Access to this E-mail by anyone else is unauthorized. If you are not an addressee, any disclosure or copying of the contents of this E-mail or any action taken (or not taken) in reliance on it is unauthorized and may be unlawful. If you are not an addressee, please inform the sender immediately.
