David, The problem: PyMOL sorts PDB hetatms apart from molecules. The solution:
alter all, type=ATOM sort rebuild Im thinking about disabling this behavior before the next release Cheers, Warren -- mailto:war...@delanoscientific.com Warren L. DeLano, Ph.D. Principal Scientist DeLano Scientific LLC Voice (650)-346-1154 Fax (650)-593-4020 -----Original Message----- From: pymol-users-ad...@lists.sourceforge.net [mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of David A. Horita Sent: Tuesday, August 05, 2003 1:53 PM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] cartoons through nonstandard residues Hi, When I try to draw a cartoon through the backbone of a nonstandard residue (in this case, phosphotyrosine), the cartoon strand stops prior to the PTR and starts after. How do I get a continuous strand through the phosphotyrosine backbone (or other residues, in the general case)? Ribbons seem to go through the PTR without problem, and selenomets don't seem to cause trouble, either. Thanks, David Horita ----------------------------- David A. Horita, Ph.D. Department of Biochemistry Wake Forest University School of Medicine Winston-Salem, NC 27157-1016 Tel: 336 713-4194 Fax: 336 716-7671 email: dhor...@wfubmc.edu web: http://www.wfubmc.edu/biochem/faculty/Horita/
