Hi Dirk,
The best way to go there is to create two objects. One of one part of
the protein and one of the other, and show the surfaces of each of them.
Good luck,
Tsjerk
Dirk Kostrewa wrote:
Dear PyMol users,
I'm currently trying to display individual surfaces around different
selections of a molecule to show how they contact each other. However, either
I get only the last surface displayed or a joined surface using the command
examples below:
this one gives only the surface of residue 440
show surface, ( resid 431 )
flag ignore, ( not resid 431 )
show surface, ( resid 440 )
flag ignore, ( not resid 440 )
rebuild
whereas this one gives the joint surface of residues 431 and 440
show surface, ( resid 431 or resid 440 )
flag ignore, ( not ( resid 431 or resid 440 ) )
rebuild
How can I display the individual surfaces separately?
Alternatively, is there a command to display atoms in a CPK representation?
Best regards,
Dirk.
--
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-- :)
-- :) Tsjerk A. Wassenaar, M.Sc.
-- :) Molecular Dynamics Group
-- :) Dept. of Biophysical Chemistry
-- :) University of Groningen
-- :) Nijenborgh 4
-- :) 9747 AG Groningen
-- :) The Netherlands
-- :)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-- :)
-- :) Hi! I'm a .signature virus!
-- :) Copy me into your ~/.signature to help me spread!
-- :)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~