[PyMOL] AMBER Style Hydrogen

[Kaushik Raha]

Hi,

I was using the add hydrogen functionality in PyMOL which works fine 
but it places the hydrogens after the heavy atoms in a protein. Is it 
possible to have AMBER style hydrogens added where the Hydrogens go 
after the heavy atom it is attached to? Better still can I have the 
names of the hydrogens similar to the AMBER hydrogens. I notice that 
the Chempy has AMBER libraries so is it possible to use that library to 
protonate  proteins?

Thanks,

Kaushik Raha.