Hi Peter,
Just to provide report that 611 driver works without problem with:
- pymol 0.97
- python 2.3.3
- 2.6.7-gentoo-r12 kernel
- nvidia-kernel-1.0.6111
- nvidia-glx-1.0.6111
- xfree-4.3.0
- GeForce2 Go graphic card (as well as three other types of cards)
Cheers,
Stéphane
=================================================
Stéphane M. Gagné, Ph.D.
Professeur, biochimie et CREFSIP
3255 pavillon Marchand
Université Laval, Québec, Canada G1K 7P4
Téléphone (bureau): (418) 656-7860
Téléphone (labo): (418) 656-2131, poste 4530
Télécopieur (Fax): (418) 656-7176
courrier électronique: sga...@rsvs.ulaval.ca
=================================================
Yu Chen wrote:
Hi, Peter
What Linux are you using? Seems it's not a problem on RedHat linux, I
am running both 7.3 and EL-AS, with 2.4.20 and 2.4.21 kernel
respectively, and the exact same NVIDIA version without any problem at
all.
Although we are using python2.2, looks like you are using python2.3,
maybe that's the problem?
Best
Chen
On Wed, 13 Oct 2004 peter.du...@cellbio.unige.ch wrote:
Hello.
I did a scan (albeit brief) of the mailing list for this issue, but
didn't find
it, so I decided to post it FYI.
I wanted to mention a serious issue I just discovered after
installing the new
nvidia drivers for linux (specifically regarding the
"NVIDIA-Linux-x86-1.0-6111-pkg1.run" driver, though I imagine the
same is true
for all other 6111 drivers), on a 2.4.x kernel, as well as the
solution. It may
be important to make a note of this somewhere in the FAQ or installation
instructions (or perhaps it would be easy to fix in one of the pymol
scripts).
PROBLEM:
========
Running Pymol gives the following message:
Traceback (most recent call last):
File "/usr/lib/python2.3/site-packages/pymol/__init__.py", line 90,
in ?
import pymol
File "/usr/lib/python2.3/site-packages/pymol/__init__.py", line 306,
in ?
import _cmd
ImportError: libnvidia-tls.so.1: cannot handle TLS data
SOLUTIONS:
==========
There are 2 solutions to this problem.
(1) either rename /usr/lib/tls to something else, or delete it
entirely. Pymol
then works perfectly ok. However, since this is akin to "If it hurts,
cut it
off", it might break something down the line. Do note though, that
the files
contained within this dir are also in /usr/lib (not a symbolic link).
(2) edit /etc/default/nvidia-glx (if it exists, for me it didn't),
and set
USE_TLS to 0. Reboot. Surely there must be another editable config file
somewhere with this option, but I haven't found it.
According to a thread on PyKDE, "The tls (thread local storage) stuff
only
works if you are running a tls-enabled glibc on a 2.6 kernel, and when
installing nvidia-glx, you are normally asked by debconf on what to
use."
This suggests anyone running the new nvidia drivers on a 2.4.x kernel
may
encounter this problem. Admittedly, I haven't tested them on a 2.6.x
kernel, so
I can't be sure the problem doesn't occur there either.
Hope this helps someone.
Cheers,
Peter
_.--'"`'--._ _.--'"`'--._ _.--'"`'--._ _
-:`.'|`|"':-. '-:`.'|`|"':-. '-:`.'|`|"':-. '.` :
'. | | | |'. '. | | | |'. '. | | | |'. '.:
'. '.| | | | '. '.| | | | '. '.| | | | '. '.
'. `.:_ | :_.' '. `.:_ | :_.' '. `.:_ | :_.' '. `.
`-..,..-' `-..,..-' `-..,..-' `
Laboratory of Dr. Didier Picard
University of Geneva
Department of Cell Biology
Scinces III
30, Quai Ernest-Ansermet
1211 Geneva 4
Switzerland
Tel: +41 22 379 3254
Fax: +41 22 379 6442
Email: du...@cellbio.unige.ch
http://www.picard.ch/DP/DPhome.html
_.--'"`'--._ _.--'"`'--._ _.--'"`'--._ _
-:`.'|`|"':-. '-:`.'|`|"':-. '-:`.'|`|"':-. '.` :
'. | | | |'. '. | | | |'. '. | | | |'. '.:
'. '.| | | | '. '.| | | | '. '.| | | | '. '.
'. `.:_ | :_.' '. `.:_ | :_.' '. `.:_ | :_.' '. `.
`-..,..-' `-..,..-' `-..,..-' `
-------------------------------------------------------
This SF.net email is sponsored by: IT Product Guide on ITManagersJournal
Use IT products in your business? Tell us what you think of them.
Give us
Your Opinions, Get Free ThinkGeek Gift Certificates! Click to find
out more
http://productguide.itmanagersjournal.com/guidepromo.tmpl
_______________________________________________
PyMOL-users mailing list
PyMOL-users@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/pymol-users
-------------------------------------------------------
This SF.net email is sponsored by: IT Product Guide on ITManagersJournal
Use IT products in your business? Tell us what you think of them. Give us
Your Opinions, Get Free ThinkGeek Gift Certificates! Click to find out
more
http://productguide.itmanagersjournal.com/guidepromo.tmpl
_______________________________________________
PyMOL-users mailing list
PyMOL-users@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/pymol-users