show sticks, [selection] around [angstoms] or more usefully:
show sticks, byres [selection] around [angstoms] You can load a map in a similiar manner. This is also in the manual so I would suggest looking there first, it's quicker than waiting for a list reply. Cheers, JTM "We can be sure that if a detailed understanding of the molecular basis of chemo-therapeutic activity were to be obtained, the advance of medicine would be greatly accelerated." Linus Pauling, Nobel Laureate 1954 "...everything that living things do can be understood in terms of the jigglings and wigglings of atoms." Richard Feynman, Nobel Laureate 1965 ************************* Jason Thomas Maynes PhD/MD Program Department of Biochemistry Faculty of Medicine University of Alberta ja...@biochem.ualberta.ca ************************* ----- Original Message ----- From: Stefano Marzi <stefano.ma...@unicam.it> Date: Monday, February 7, 2005 8:09 am Subject: [PyMOL] cut-off distance > Hi, > Does anybody knows if PyMol is implemented with a cut-off > distance feature, i.e. if I can select some atoms on my > structure and visualize only the portion of the fitted > density map that is located at a defined distance from my > selection? > Thank you > Stefano > > __________________________________________________________ > Stefano Marzi, Ph.D. > Lab. di Genetica > Dip. Biologia M.C.A. e-mail: stefano.ma...@unicam.it > Universita' di Camerino > 62032 Camerino, Italy > > > ------------------------------------------------------- > This SF.Net email is sponsored by: IntelliVIEW -- Interactive > ReportingTool for open source databases. Create drag-&-drop > reports. Save time > by over 75%! Publish reports on the web. Export to DOC, XLS, RTF, etc. > Download a FREE copy at http://www.intelliview.com/go/osdn_nl > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users >
