I think you can try:
ffout=open('secstruc.txt','w')
iterate name ca, ffout.write(repr((chain, resi, ss)))
Hope it works, but otherwise Warren will correct me :)
Tsjerk
On Fri, 17 Jun 2005 11:12:53 -0400
hari jayaram <hari...@gmail.com> wrote:
I am sorry for being so needy ..Is there a way to
quickly write this out to
a file..I am a total python non savant and I have spent
the last hour
struggling with file open and write commands and gotten
nowhere.
So how do I write out the result of
iterate name ca, print chain,resi,ss
to a file .
Thanks again
Hari Jayaram
Brandeis University
On 6/17/05, Warren DeLano <war...@delsci.com> wrote:
iterate name ca, print chain,resi,ss
--
Warren L. DeLano, Ph.D.
Principal Scientist
. DeLano Scientific LLC
. 400 Oyster Point Blvd., Suite 213
. South San Francisco, CA 94080 USA
. Biz:(650)-872-0942 Tech:(650)-872-0834
. Fax:(650)-872-0273 Cell:(650)-346-1154
. mailto:war...@delsci.com
> -----Original Message-----
> From: pymol-users-ad...@lists.sourceforge.net
> [mailto:pymol-users-ad...@lists.sourceforge.net] On
Behalf Of
> hari jayaram
> Sent: Friday, June 17, 2005 5:33 AM
> To: pymol-users@lists.sourceforge.net
> Subject: [PyMOL] how to get pymol sec structure
assignments
> printed out
>
> Hi
> I was just wondering how to get the pymol secondary
structure
> assignments printed out .
> I was looking to manually do this for all the helix
and
> strand starts and stops..but I was wondering if there
is some
> way to have it print to the screen or a file the
assignments
> it uses for the cartoons...
> like
> helix from A1 to A50 ..
>
> Thanks for your help in advance
> Hari Jayaram
> Brandeis University
>
>
