Hey,
The rotamer toggle script originally loaded the Dunbrack
Backbone-Dependent rotamer library upon PyMOL startup. However, I've
changed it so that it will get loaded the first time you try to access
the rotamer menu instead. The code is fixed on www.PyMOLwiki.org . Now
PyMOL will start at regular speed. Thanks for the catching the 'bug' Xavier.
I beleive the mutagensis wizard in the newer ( > 0.98) will incorporate
the Dunbrack library in some way or another.
~Dan Kulp
Xavier Deupi wrote:
Hi,
I've just realized that through the mutagenesis wizard you can
view/select different conformations for a sidechain. I've been playing
around, and it seems that the conformations are selected according to
a backbone-independent rotamer library. Am I correct? Which library
has been used?
I would also like to know if there is anybody out there using the
rotamer toggle plugin. I've just installed it, and although it seems
extremely useful, it makes PyMOL very slow to start. I'm running PyMOL
0.98 for MacOSX in a PowerBook G4 1GHz with 1Gb of RAM (running MacOS
X 10.4.2)
Thanks in advance,
Xavier
--
Dan Kulp
Biophysics Graduate Student @ UPenn
dwk...@mail.med.upenn.edu
http://dwkulp.homelinux.net/tiki/tiki-index.php
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