On Mon, 12 Sep 2005, Anna Feldman-Salit wrote:
Dear All,
I have a 0.98 PyMol version with APBS and Iso_Sliders plugins. However,
my aim is not just visualize isosurfaces of electrostatic potential at
certain values, but to display/map it on molecular surface.
Hi,
The APBS plugin will show you the electrostatic potential mapped onto the
molecular surface.
1) Load your molecule of choice.
2) Open up the APBS Plugin
3) Click on "Set grid"
4) Click on "Run APBS"
5) Click on the Visualization tab
6) Click on "Update"
7) Use the tools in the "Molecular Surface" box .. e.g. click on "Show" to
show the potential mapped onto the molecular surface.
Does this do what you want, or are you looking for something else?
I googled around, but could not find the Iso_Sliders plugins, so I can't
help you with those.
-michael
--
www.umich.edu/~mlerner | _ |Michael Lerner
This isn't a democracy;| ASCII ribbon campaign ( ) | Michigan
it's a cheer-ocracy. | - against HTML email X | Biophysics
-Torrence, Bring It On| / \ | mler...@umich
Would you be so kind to share your knowledge with me on this subject?
I'd appreciate any help or advice of yours!
Thanks,
Anna.
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