> My question is: how to save multiple objects from pymol as one nice pdb > file, for instance with each object with different chain name?
alter SymgenObject,chain 'X' and repeat as needed for all objects (changing the chain as needed). Then use all of your objects as the selection for save (aka save AllObjects.pdb,(original,sym1,sym2) ) Pete Pete Meyer Fu Lab BMCB grad student Cornell University
