FYI: In the development code, I've added a new "segi" option to "symexp" that will automatically assign a unique segment ID to symmetry-generated molecules.
This will allow a use case such as follows: % pymol load $PYMOL_PATH/test/dat/1tii.pdb symexp s, 1tii, 1tii, 20.0, segi=1 save packing.pdb, all quit % pymol packing.pdb Cheers, Warren -- Warren L. DeLano, Ph.D. Principal Scientist . DeLano Scientific LLC . 400 Oyster Point Blvd., Suite 213 . South San Francisco, CA 94080 USA . Biz:(650)-872-0942 Tech:(650)-872-0834 . Fax:(650)-872-0273 Cell:(650)-346-1154 . mailto:war...@delsci.com > -----Original Message----- > From: pymol-users-ad...@lists.sourceforge.net > [mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of > Peter Adrian Meyer > Sent: Monday, November 21, 2005 11:45 AM > To: kosa > Cc: pymol-users@lists.sourceforge.net > Subject: Re: [PyMOL] saving multiple object in one pdb file > > > > > My question is: how to save multiple objects from pymol as one nice > > pdb file, for instance with each object with different chain name? > > alter SymgenObject,chain 'X' > > and repeat as needed for all objects (changing the chain as > needed). Then use all of your objects as the selection for > save (aka save > AllObjects.pdb,(original,sym1,sym2) ) > > Pete > > Pete Meyer > Fu Lab > BMCB grad student > Cornell University > > > > ------------------------------------------------------- > This SF.Net email is sponsored by the JBoss Inc. Get > Certified Today Register for a JBoss Training Course. Free > Certification Exam for All Training Attendees Through End of > 2005. For more info visit: > http://ads.osdn.com/?ad_id=7628&alloc_id=16845&op=click > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users > > > >
