Hello Margaret, * Margaret Luk-Paszyc <m...@pharm.stonybrook.edu> [2006-10-15 14:07] wrote: > Hello -- > > Can someone please advise me? > I'm a new user of PyMol trying to get the kabsch alignment > script to work. I only installed the main pymol installer > (v 0.99r6), and I have copied the kabsch.py script as the > wiki said. However, I can't find this Numeric.py you are > referring to in the wiki... The wiki infers that the > Numeric.py script is a native part of the installer, but I > don't seem to have it in my folders anywhere. Obviously, > kabsch doesn't want to run either. I am running PyMol > v0.99r6 on RHE4 (intel32). > > I'm a bit of a newbie when it comes to the more advanced > tools with PyMol, so maybe I forget to install something? > Does it require the APBS plugin to work?
Numeric is a python module (independent of PyMOL) that you need to install. If you do a google search for "python-numeric rpm rhel4" you would find something like this: http://rpm.pbone.net/index.php3/stat/4/idpl/1953241/com/python-numeric-23.7-2.i386.rpm.html There you will find a number of links to the python-numeric-23.7-2.i386.rpm file that you need to install (I'm assuming that version 23.7.2 works here). Perhaps another RHEL4 user can offer better advice. I use Debian GNU/Linux myself. Cheers, Rob -- Robert L. Campbell, Ph.D. Senior Research Associate/Adjunct Assistant Professor Department of Biochemistry, Queen's University Kingston, ON K7L 3N6 Canada Tel: 613-533-6821 Fax: 613-533-2497 <robert.campb...@queensu.ca> http://adelie.biochem.queensu.ca/~rlc
