Did you create a new object for the ligand? Try creating 2 objects,
one for ligand and one for protein w/o ligand.
Andrew
On 11/2/06, Simon Holton <[email protected]> wrote:
Hi Folks,
I'm trying to generate a surface for a ligand which is part of a
ligand-protein complex. I realise this is the other way around to
normal, but somehow when I select the ligand in pymol and then 'show
surface, ligand', absolutely nothing happens. No error, but no
surface. The same happens if I just open a pdb file describing the
ligand alone. Other representations work, but the problem is not PDB
specific. I'm using the macpymol X11 hybrid (0.98)
Any suggestions?
Cheers
SImon
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