Hi, I found a critical and reproducible bug using the 0.99rc6-binarys on my machine.
Stepps: - starting pymol from a kde terminal with user-rights - loading a pdb-file (e.g. 1K5D from pdb-database) - rotate the molecule with the mouse in any direction - hitting "Esc" to get to the commandline-mode - hitting "Esc" again to get back to the visualisation-mode - trying to rotate the molecule again with the mouse The programm crashes, the two windows of pymol disappear and my terminal-window show the following error: >./pymol: line 14: 7110 Speicherzugriffsfehler $PYMOL_PATH/pymol.exe "$@" "Speicherzugriffsfehler" is the german word for segmentation fault. There is nothing in dmseg. The full output: >cseif...@lexx ~/pymol $ ./pymol > > PyMOL(TM) Incentive Product - Copyright (C) 2006 DeLano Scientific LLC. > > A current PyMOL Maintenance and/or Support Subscription may be required > for legal use of this Build beyond a finite honor-system evaluation period. > Please visit http://www.pymol.org/funding.html for more information. > > This PyMOL Executable Build incorporates Open-Source PyMOL 0.99rc6. > OpenGL graphics engine: > GL_VENDOR: ATI Technologies Inc. > GL_RENDERER: ATI MOBILITY FireGL V5200 Pentium 4 (SSE2) (FireGL) (GNU_ICD) > GL_VERSION: 2.0.5946 (8.27.10) > Detected 2 CPUs. Enabled multithreaded rendering. >HEADER SIGNALING PROTEIN/SIGNALING ACTIVATOR 10-OCT-01 1K5D >TITLE CRYSTAL STRUCTURE OF RAN-GPPNHP-RANBP1-RANGAP COMPLEX >COMPND MOL_ID: 1; >COMPND 2 MOLECULE: GTP-BINDING NUCLEAR PROTEIN RAN; >COMPND 3 CHAIN: A, D, G, J; >COMPND 4 SYNONYM: RAN, TC4, RAN GTPASE, ANDROGEN RECEPTOR- >COMPND 5 ASSOCIATED PROTEIN 24; >COMPND 6 ENGINEERED: YES; >COMPND 7 MOL_ID: 2; >COMPND 8 MOLECULE: RAN-SPECIFIC GTPASE-ACTIVATING PROTEIN; >COMPND 9 CHAIN: B, E, H, K; >COMPND 10 SYNONYM: RANBP1, RAN BINDING PROTEIN 1; >COMPND 11 ENGINEERED: YES; >COMPND 12 MUTATION: YES; >COMPND 13 MOL_ID: 3; >COMPND 14 MOLECULE: RAN GTPASE ACTIVATING PROTEIN 1; >COMPND 15 CHAIN: C, F, I, L; >COMPND 16 SYNONYM: RANGAP, PROTEIN RNA1; >COMPND 17 ENGINEERED: YES > ObjectMolecule: Read secondary structure assignments. > ObjectMolecule: Read crystal symmetry information. > Symmetry: Found 1 symmetry operators. > CmdLoad: "/home/cseifert/Desktop/1K5D.pdb" loaded as "1K5D". >./pymol: line 14: 7110 Speicherzugriffsfehler $PYMOL_PATH/pymol.exe "$@" Thanks, Christian Seifert.
