Free Api documentation:
#1 is the source code itself (doc strings in modules/pymol/*.py)
#2 are all the commands on pymolwiki.org, which are close to one to
one with the API
Cheers,
Warren
--
Warren L. DeLano, Ph.D.
war...@delsci.com
On Feb 27, 2009, at 7:18 AM, "Tsjerk Wassenaar" <tsje...@gmail.com>
wrote:
No, but naming is usually fairly intuitive, so you can browse through
the module properties:
print dir(cmd)
or
/for i in dir(cmd): print i
or even (to get the functions):
/for i in dir(cmd): callable( getattr( cmd, i ) ) and print i
Cheers,
Tsjerk
On Fri, Feb 27, 2009 at 4:10 PM, Jan Kosinski <k...@genesilico.pl>
wrote:
Thanks, that works!
Is there an API reference to pymol for non-sponsor users?
Tsjerk Wassenaar wrote:
Hi Janek,
You want:
cmd.get_object_list()
For instance, I sometimes want to align a whole lot of things,
which I do
with:
/for i in cmd.get_object_list(): cmd.align( i, reference )
Hope it helps,
Tsjerk
On Fri, Feb 27, 2009 at 3:44 PM, Jan Kosinski <k...@genesilico.pl>
wrote:
Hi,
I wish to iterate over all objects in my pymol session and for each
execute some command. Is it possible to do that using pymol
commands?
I could do that using python script but: How can I get a list of
current
objects?
Cheers,
Janek
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--
Tsjerk A. Wassenaar, Ph.D.
Junior UD (post-doc)
Biomolecular NMR, Bijvoet Center
Utrecht University
Padualaan 8
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The Netherlands
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Open Source Business Conference (OSBC), March 24-25, 2009, San
Francisco, CA
-OSBC tackles the biggest issue in open source: Open Sourcing the
Enterprise
-Strategies to boost innovation and cut costs with open source
participation
-Receive a $600 discount off the registration fee with the source
code: SFAD
http://p.sf.net/sfu/XcvMzF8H
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