I've just update my source code.
So what you need to do is uncomment lines 126, 127, 146 and change the zero
on line 293 with a 1.
Let me now if this works. I don't have a dcd trajectory in order to test
this.
Marius
On Tue, Sep 15, 2009 at 3:45 PM, Hugo G. de Teran <hugo.te...@usc.es> wrote:
> I did that now, run again
> pymol setup.py build install
> pymol setup2.py install
> but still the same error ...
>
> Hugo
>
> Marius Retegan wrote:
> > Did you uncomment in setup.py the lines related to VMD support?
> >
> > On Tue, Sep 15, 2009 at 3:07 PM, Hugo G. de Teran <hugo.te...@usc.es>
> wrote:
> >
> >
> >> Hi,
> >>
> >> I am trying to use the load_traj command to load dcd files. Holever, I
> >> get the following error:
> >> PyMOL>load_traj ../../1bwb/dc1.dcd, initial,
> >> ObjectMolecule-Error: sorry, VMD Molfile Plugins not compiled into this
> >> build.
> >>
> >> I have installed pymol from source with the default method (i.e., python
> >> install scripts) on my opensuse11.1 x86_64
> >>
> >> Thanks for help,
> >>
> >> Hugo
> >>
> >>
> >>
> >> --
> >> Hugo G. de Teran, PhD.
> >> "Parga Pondal" Research fellow
> >> Fundación Pública Galega de Medicina Xenómica - SERGAS
> >> Santiago de Compostela (SPAIN)
> >>
> >> Phone +34 981563100 ext 13873
> >> e-mail:hugo.te...@usc.es <e-mail%3ahugo.te...@usc.es> <
> e-mail%3ahugo.te...@usc.es <e-mail%253ahugo.te...@usc.es>>
> >> http://web.usc.es/~hugogdt <http://web.usc.es/%7Ehugogdt> <
> http://web.usc.es/%7Ehugogdt>
> >>
> >>
> >>
> >>
> >>
> ------------------------------------------------------------------------------
> >> Come build with us! The BlackBerry® Developer Conference in SF, CA
> >> is the only developer event you need to attend this year. Jumpstart your
> >> developing skills, take BlackBerry mobile applications to market and
> stay
> >> ahead of the curve. Join us from November 9-12, 2009. Register
> now!
> >> http://p.sf.net/sfu/devconf
> >> _______________________________________________
> >> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
> >> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
> >> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
> >>
> >>
> >
> > --0016e6db2dbbff30f304739dc03a
> > Content-Type: text/html; charset=O-8859-1
> > Content-Transfer-Encoding: quoted-printable
> >
> > Did you uncomment in setup.py the lines related to VMD
> support?<br><br><div class="gmail_quote">On Tue, Sep 15, 2009 at 3:07 PM,
> Hugo G. de Teran <span dir="ltr"><<a
> href="mailto:hugo.te...@usc.es";>hDelivered-To:
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> > 15 Sep 2009 06:28:11 -0700 (PDT)
> > In-Reply-To: <4aaf9176.8090...@usc.es>
> > References: <4aaf9176.8090...@usc.es>
> > Date: Tue, 15 Sep 2009 15:28:11 +0200
> > Message-ID: <52298ae10909150628j5a6f1ad8i6ca8664e2c47f...@mail.gmail.com
> >
> > Subject: Re: [PyMOL] load dcd files problem
> > From: Marius Retegan <marius.s.rete...@gmail.com>
> > To: "Hugo G. de Teran" <hugo.te...@usc.es>
> > Content-Type: multipart/alternative; boundary
> > --0016e6db2dbbff30f304739dc03a
> > Content-Type: text/plain; charset=O-8859-1
> > Content-Transfer-Encoding: quoted-printable
> >
> > Did you uncomment in setup.py the lines related to VMD support?
> >
> > On Tue, Sep 15, 2009 at 3:07 PM, Hugo G. de Teran <hugo.te...@usc.es>
> wrote:
> >
> >
> >> Hi,
> >>
> >> I am trying to use the load_traj command to load dcd files. Holever, I
> >> get the following error:
> >> PyMOL>load_traj ../../1bwb/dc1.dcd, initial,
> >> ObjectMolecule-Error: sorry, VMD Molfile Plugins not compiled into this
> >> build.
> >>
> >> I have installed pymol from source with the default method (i.e., python
> >> install scripts) on my opensuse11.1 x86_64
> >>
> >> Thanks for help,
> >>
> >> Hugo
> >>
> >>
> >>
> >> --
> >> Hugo G. de Teran, PhD.
> >> "Parga Pondal" Research fellow
> >> Fundación Pública Galega de Medicina Xenómica - SERGAS
> >> Santiago de Compostela (SPAIN)
> >>
> >> Phone +34 981563100 ext 13873
> >> e-mail:hugo.te...@usc.es <e-mail%3ahugo.te...@usc.es> <
> e-mail%3ahugo.te...@usc.es <e-mail%253ahugo.te...@usc.es>>
> >> http://web.usc.es/~hugogdt <http://web.usc.es/%7Ehugogdt> <
> http://web.usc.es/%7Ehugogdt>
> >>
> >>
> >>
> >>
> >>
> ------------------------------------------------------------------------------
> >> Come build with us! The BlackBerry® Developer Conference in SF, CA
> >> is the only developer event you need to attend this year. Jumpstart your
> >> developing skills, take BlackBerry mobile applications to market and
> stay
> >> ahead of the curve. Join us from November 9-12, 2009. Register
> now!
> >> http://p.sf.net/sfu/devconf
> >> _______________________________________________
> >> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
> >> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
> >> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
> >>
> >>
> >
> > --0016e6db2dbbff30f304739dc03a
> > Content-Type: text/html; charset=O-8859-1
> > Content-Transfer-Encoding: quoted-printable
> >
> > Did you uncomment in setup.py the lines related to VMD
> support?<br><br><div class="gmail_quote">On Tue, Sep 15, 2009 at 3:07 PM,
> Hugo G. de Teran <span dir="ltr"><<a href="mailto:hugo.te...@usc.es";>
> hugo.te...@usc.es</a>></span> wrote:<br>
> > <blockquote class="gmail_quote" style="border-left: 1px solid rgb(204,
> 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">Hi,<br>
> > <br>
> > I am trying to use the load_traj command to load dcd files. Holever,
> I<br>
> > get the following error:<br>
> > PyMOL>load_traj ../../1bwb/dc1.dcd, initial,<br>
> > ObjectMolecule-Error: sorry, VMD Molfile Plugins not compiled into
> this<br>
> > build.<br>
> > <br>
> > I have installed pymol from source with the default method (i.e.,
> python<br>
> > install scripts) on my opensuse11.1 x86_64<br>
> > <br>
> > Thanks for help,<br>
> > <br>
> > Hugo<br>
> > <br>
> > <br>
> > <br>
> > --<br>
> > Hugo G. de Teran, PhD.<br>
> > "Parga Pondal" Research fellow<br>
> > Fundación Pública Galega de Medicina Xenómica - SERGAS<br>
> > Santiago de Compostela (SPAIN)<br>
> > <br>
> > Phone +34 981563100 ext 13873<br>
> > <a href="mailto:e-mail%3ahugo.te...@usc.es<e-mail%253ahugo.te...@usc.es>
> ">e-mail:hugo.te...@usc.es <e-mail%3ahugo.te...@usc.es></a> <a
> href="http://web.usc.es/%7Ehugogdt"; target="_blank">
> http://web.usc.es/~hugogdt <http://web.usc.es/%7Ehugogdt></a><br>
> > <br>
> > <br>
> > <br>
> >
> ------------------------------------------------------------------------------<br>
> > Come build with us! The BlackBerry&reg; Developer Conference in SF,
> CA<br>
> > is the only developer event you need to attend this year. Jumpstart
> your<br>
> > developing skills, take BlackBerry mobile applications to market and
> stay<br>
> > ahead of the curve. Join us from November 9&#45;12, 2009. Register
> now&#33;<br>
> > <a href="http://p.sf.net/sfu/devconf"; target="_blank">
> http://p.sf.net/sfu/devconf</a><br>
> > _______________________________________________<br>
> > PyMOL-users mailing list (<a href="mailto:
> PyMOL-users@lists.sourceforge.net">PyMOL-users@lists.sourceforge.net
> </a>)<br>
> > Info Page: <a href="
> https://lists.sourceforge.net/lists/listinfo/pymol-users"; target="_blank">
> https://lists.sourceforge.net/lists/listinfo/pymol-users</a><br>
> > Archives: <a href="
> http://www.mail-archive.com/pymol-users@lists.sourceforge.net";
> target="_blank">
> http://www.mail-archive.com/pymol-users@lists.sourceforge.net</a><br>
> > </blockquote></div><br>
> >
> > --0016e6db2dbbff30f304739dc03a--
> >
>
>
> --
> Hugo G. de Teran, PhD.
> "Parga Pondal" Research fellow
> Fundación Pública Galega de Medicina Xenómica - SERGAS
> Santiago de Compostela (SPAIN)
>
> Phone +34 981563100 ext 13873
> e-mail:hugo.te...@usc.es <e-mail%3ahugo.te...@usc.es>
> http://web.usc.es/~hugogdt <http://web.usc.es/%7Ehugogdt>
>
>
>
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http://p.sf.net/sfu/devconf
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