Hello there,
I am very frustrated with a very simple command, let me show:
PyMOL>rms (out and not hydrogen), (018.none_neutral.pdb_NEW and not
hydrogen)
ExecutiveRMS-Error: No atoms selected.
PyMOL>sele r, (018.none_neutral.pdb_NEW and not hydrogen)
Selector: selection "r" defined with 20 atoms.
PyMOL>select o, (out and not hydrogen)
Selector: selection "o" defined with 20 atoms.
PyMOL>rms o, r
ExecutiveRMS-Error: No atoms selected.
As you can see, I can select properly but no way of using 'rms' command.
Or "help rms" is missing something?
PyMOL>help rms
DESCRIPTION
"rms" computes a RMS fit between two atom selections, but does not
tranform the models after performing the fit.
USAGE
rms (selection), (target-selection)
EXAMPLES
fit ( mutant and name ca ), ( wildtype and name ca )
SEE ALSO
fit, rms_cur, intra_fit, intra_rms, intra_rms_cur, pair_fit
Thanks
Alan
--
Alan Wilter Sousa da Silva, D.Sc.
PDBe group, PiMS project http://www.pims-lims.org/
EMBL - EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK
+44 (0)1223 492 583 (office)
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