Dear Germain, My two suggestions:
There are some solutions for building CGOs on the wiki such as: http://pymolwiki.org/index.php/Ellipsoid You could also edit a PDB file with ANISOU entries corresponding to your dynamics calculation and use this new feature: http://www.pymolwiki.org/index.php/Ellipsoids Take care, Mike On Sun, May 2, 2010 at 2:02 PM, Germain Vallverdu < germain_vallve...@yahoo.fr> wrote: > Dear pymol users, > > I am using anisotropic potential for ellipsoidal particles and I would like > to find a way to vizualise configurations extrated from a dynamics with > pymol. I would like to know if is it a way to do so with pymol ? > > Associated with the LAMMPS program, I found a script, pymol_asphere, who > seems to do that but I do not use LAMMPS and I can not use it. > > Thank you for your help > > Germain > > - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - > Germain Salvato-Vallverdu > post-doctorant CEA/DAM/DPTA/SPMC/LDDM > 01 69 26 48 01 > PagePerso : http://germain.salvato-vallverdu.perso.sfr.fr > > > > > > > ------------------------------------------------------------------------------ > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > -- Michael Zimmermann Ph.D. student in Bioinformatics and Computational Biology Department of Biochemistry, Biophysics and Molecular Biology Iowa State University
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