Dear Thomas,
at.hetatm works perfectly! Thanks very much.
Best Regards,
Zhijian Xu
Thomas Holder wrote:
> Hi Zhijian,
>
> it's the at.hetatm attribute.
>
> try this:
> print atoms.atom[0].__dict__
>
> Cheers,
> Thomas
>
> On Sat, 2010-09-25 at 22:56 +0800, zjxu wrote:
>
>> Dear everyone,
>>
>> I could print the atom properties in a script except the atom type:
>> atoms = cmd.get_model("object")
>> for at in atoms.atom:
>> sele1 = model + " and i. " + resi
>> sele2="object and resi %s and name %s"% (at.resi, at.name)
>> #print sele1, sele2
>> dst=cmd.distance("tmp", sele1, sele2)
>> #print at.chain, at.resn, at.resi, at.name, at.index, "%8.3f"%dst
>> print model, resi, at.type, at.chain, at.resn, at.resi, at.name,
>> "%8.3f"%dst
>> everything is OK if I delete at.tpye.
>> From the error in the pymol, I could see that the attibute type does
>> not exist.
>> so how to print the atom tyep (the first column in the PDB, that is ATOM
>> or HETATM)?
>>
>> On http://www.pymolwiki.org/index.php/Label, type is one of the
>> properties of the object: *type* /(ATOM,HETATM)/, the type of atom
>>
>> Thanks very much in advance
>>
>> Best regards,
>> Zhijian Xu
>>
>> Shanghai Institute of Materia Medica, China
>>
>
>
>
>
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